Problems in Gentoo Science overlay

200 problem(s) on this page

Project Package name Maintainer Problem
angle sci-biology/ANGLE-binmmokrejs@fold.natur.cuni.cz Download link http://bioinformatics.cenargen.embrapa.br/portrait/download/angle.tar.gz is dead (HTTP 404) for more than a month and should be replaced by alive link (see other packages for hints).
angle sci-biology/ANGLE-binmmokrejs@fold.natur.cuni.cz Homepage link http://bioinformatics.cenargen.embrapa.br/portrait/download is dead (HTTP 404) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
angle sci-biology/ANGLE-binsci-biology@gentoo.org Download link http://bioinformatics.cenargen.embrapa.br/portrait/download/angle.tar.gz is dead (HTTP 404) for more than a month and should be replaced by alive link (see other packages for hints).
angle sci-biology/ANGLE-binsci-biology@gentoo.org Homepage link http://bioinformatics.cenargen.embrapa.br/portrait/download is dead (HTTP 404) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
aocl-libm sci-libs/aocl-libmsci@gentoo.org Homepage link https://developer.amd.com/amd-aocl/amd-math-library-libm/ is dead (connect timeout (60 seconds)) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
aocl-sparse sci-libs/aocl-sparsegentoo@aisha.cc Homepage link https://developer.amd.com/amd-aocl/ is dead (connect timeout (60 seconds)) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
aocl-sparse sci-libs/aocl-sparsegentoo@aisha.cc Homepage link https://developer.amd.com/amd-aocl/ is dead (connect timeout (60 seconds)) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
aocl-sparse sci-libs/aocl-sparsesci@gentoo.org Homepage link https://developer.amd.com/amd-aocl/ is dead (connect timeout (60 seconds)) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
aocl-sparse sci-libs/aocl-sparsesci@gentoo.org Homepage link https://developer.amd.com/amd-aocl/ is dead (connect timeout (60 seconds)) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
cast sci-biology/cast-binmmokrejs@fold.natur.cuni.cz Homepage link http://bioinformatics.cenargen.embrapa.br/portrait/download is dead (HTTP 404) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
cast sci-biology/cast-binmmokrejs@fold.natur.cuni.cz Download link http://bioinformatics.cenargen.embrapa.br/portrait/download/cast-linux.tar.gz is dead (HTTP 404) for more than a month and should be replaced by alive link (see other packages for hints).
cast sci-biology/cast-binsci-biology@gentoo.org Homepage link http://bioinformatics.cenargen.embrapa.br/portrait/download is dead (HTTP 404) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
cast sci-biology/cast-binsci-biology@gentoo.org Download link http://bioinformatics.cenargen.embrapa.br/portrait/download/cast-linux.tar.gz is dead (HTTP 404) for more than a month and should be replaced by alive link (see other packages for hints).
cernbox net-misc/cernbox-cliento.freyermuth@googlemail.com Download link https://cernboxdistr.web.cern.ch/cernboxdistr/Linux/repo.future/Fedora_38/src/cernbox-client-4.1.0-11373.src.rpm is dead (HTTP 404) for more than a month and should be replaced by alive link (see other packages for hints).
cernbox net-misc/cernbox-cliento.freyermuth@googlemail.com Download link https://cernboxdistr.web.cern.ch/cernboxdistr/Linux/repo.future/Fedora_38/src/cernbox-client-4.1.0-11373.src.rpm is dead (HTTP 404) for more than a month and should be replaced by alive link (see other packages for hints).
cernbox net-misc/cernbox-clientsci-physics@gentoo.org Download link https://cernboxdistr.web.cern.ch/cernboxdistr/Linux/repo.future/Fedora_38/src/cernbox-client-4.1.0-11373.src.rpm is dead (HTTP 404) for more than a month and should be replaced by alive link (see other packages for hints).
cernbox net-misc/cernbox-clientsci-physics@gentoo.org Download link https://cernboxdistr.web.cern.ch/cernboxdistr/Linux/repo.future/Fedora_38/src/cernbox-client-4.1.0-11373.src.rpm is dead (HTTP 404) for more than a month and should be replaced by alive link (see other packages for hints).
chimera sci-chemistry/chimerapacho@gentoo.org Homepage link https://www.cgl.ucsf.edu/chimera/ is dead (DNS error) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
chimera sci-chemistry/chimerapacho@gentoo.org Homepage link https://www.cgl.ucsf.edu/chimera/ is dead (DNS error) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
chimera sci-chemistry/chimerasci-chemistry@gentoo.org Homepage link https://www.cgl.ucsf.edu/chimera/ is dead (DNS error) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
chimera sci-chemistry/chimerasci-chemistry@gentoo.org Homepage link https://www.cgl.ucsf.edu/chimera/ is dead (DNS error) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
delphes sci-physics/delphesalexander@neuwirth-informatik.de Homepage link http://cp3.irmp.ucl.ac.be/projects/delphes is a permanent redirect to its HTTPS counterpart https://cp3.irmp.ucl.ac.be/projects/delphes and should be updated.
delphes sci-physics/delphesalexander@neuwirth-informatik.de Homepage link http://cp3.irmp.ucl.ac.be/projects/delphes is a permanent redirect to its HTTPS counterpart https://cp3.irmp.ucl.ac.be/projects/delphes and should be updated.
delphes sci-physics/delphessci-physics@gentoo.org Homepage link http://cp3.irmp.ucl.ac.be/projects/delphes is a permanent redirect to its HTTPS counterpart https://cp3.irmp.ucl.ac.be/projects/delphes and should be updated.
delphes sci-physics/delphessci-physics@gentoo.org Homepage link http://cp3.irmp.ucl.ac.be/projects/delphes is a permanent redirect to its HTTPS counterpart https://cp3.irmp.ucl.ac.be/projects/delphes and should be updated.
dl-poly sci-chemistry/dl_polyottxor@gentoo.org Homepage link http://www.ccp5.ac.uk/DL_POLY_CLASSIC/ is dead (HTTP 404) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
dl-poly sci-chemistry/dl_polysci-chemistry@gentoo.org Homepage link http://www.ccp5.ac.uk/DL_POLY_CLASSIC/ is dead (HTTP 404) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
dpc++ sys-devel/DPC++sci@gentoo.org Download link https://github.com/intel/cm-cpu-emulation/archive/refs/tags/v2022-08-22.tar.gz is dead (HTTP 404) for more than a month and should be replaced by alive link (see other packages for hints).
dpc++ sys-devel/DPC++sci@gentoo.org Download link https://github.com/intel/cm-cpu-emulation/archive/refs/tags/v2022-08-22.tar.gz is dead (HTTP 404) for more than a month and should be replaced by alive link (see other packages for hints).
dpc++ sys-devel/DPC++sci@gentoo.org Download link https://github.com/intel/cm-cpu-emulation/archive/refs/tags/v2022-08-22.tar.gz is dead (HTTP 404) for more than a month and should be replaced by alive link (see other packages for hints).
drawxtl sci-chemistry/drawxtlsci-chemistry@gentoo.org Download link http://www.lwfinger.com/drawxtl/DRAWxtl45.tar.gz is a permanent redirect to its HTTPS counterpart https://www.lwfinger.com/drawxtl/DRAWxtl45.tar.gz and should be updated.
drawxtl sci-chemistry/drawxtlsci-chemistry@gentoo.org Download link http://www.lwfinger.com/drawxtl/DRAWxtl55.tar.gz is a permanent redirect to its HTTPS counterpart https://www.lwfinger.com/drawxtl/DRAWxtl55.tar.gz and should be updated.
elmerfem sci-misc/elmer-femsci@gentoo.org Homepage link https://sourceforge.net/projects/svn/ is dead (HTTP 404) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
environment-modules sys-cluster/modulesbtbn@btbn.de Homepage link http://modules.sourceforge.net/ is a permanent redirect to its HTTPS counterpart https://modules.sourceforge.net/ and should be updated.
environment-modules sys-cluster/modulessci@gentoo.org Homepage link http://modules.sourceforge.net/ is a permanent redirect to its HTTPS counterpart https://modules.sourceforge.net/ and should be updated.
envytools x11-misc/envytoolsalexxy@gentoo.org Homepage link https://github.com/pathscale/envytools is dead (HTTP 404) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
envytools x11-misc/envytoolsalexxy@gentoo.org Homepage link https://github.com/pathscale/envytools is dead (HTTP 404) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
envytools x11-misc/envytoolssci@gentoo.org Homepage link https://github.com/pathscale/envytools is dead (HTTP 404) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
envytools x11-misc/envytoolssci@gentoo.org Homepage link https://github.com/pathscale/envytools is dead (HTTP 404) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
fdlibm sci-libs/fdlibmsci@gentoo.org Homepage link https://www.netlib.org/fdlibm is dead (DNS error: timeout while contacting DNS servers) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
fits-astronomical-image-format dev-java/fitssci@gentoo.org Homepage link http://fits.gsfc.nasa.gov/fits_libraries.html is a permanent redirect to its HTTPS counterpart https://fits.gsfc.nasa.gov/fits_libraries.html and should be updated.
fits-astronomical-image-format dev-java/fitssci@gentoo.org Download link http://heasarc.gsfc.nasa.gov/docs/heasarc/fits/java/v1.0/v1.15.1/fits.jar is a permanent redirect to its HTTPS counterpart https://heasarc.gsfc.nasa.gov/docs/heasarc/fits/java/v1.0/v1.15.1/fits.jar and should be updated.
freebayes sci-biology/freebayesmmokrejs@fold.natur.cuni.cz Homepage link https://github.com/ekg/freebayes is dead (DNS error: timeout while contacting DNS servers) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
freebayes sci-biology/freebayessci-biology@gentoo.org Homepage link https://github.com/ekg/freebayes is dead (DNS error: timeout while contacting DNS servers) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
gamess sci-chemistry/gamessalexxy@gentoo.org Homepage link https://www.msg.chem.iastate.edu/GAMESS/GAMESS.html is dead (SSL error: incomplete certificate chain) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
gamess sci-chemistry/gamesssci-chemistry@gentoo.org Homepage link https://www.msg.chem.iastate.edu/GAMESS/GAMESS.html is dead (SSL error: incomplete certificate chain) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
gdcm sci-libs/gdcmfx.carton91@gmail.com Homepage link http://gdcm.sourceforge.net/ is a permanent redirect to its HTTPS counterpart https://gdcm.sourceforge.net/ and should be updated.
gdcm sci-libs/gdcmfx.carton91@gmail.com Homepage link http://gdcm.sourceforge.net/ is a permanent redirect to its HTTPS counterpart https://gdcm.sourceforge.net/ and should be updated.
germline sci-biology/germlinemmokrejs@fold.natur.cuni.cz Homepage link http://genome.cshlp.org/content/19/2/318.full is a permanent redirect to its HTTPS counterpart https://genome.cshlp.org/content/19/2/318.full and should be updated.
germline sci-biology/germlinesci-biology@gentoo.org Homepage link http://genome.cshlp.org/content/19/2/318.full is a permanent redirect to its HTTPS counterpart https://genome.cshlp.org/content/19/2/318.full and should be updated.
gffcompare sci-biology/gffcomparemmokrejs@fold.natur.cuni.cz Homepage link http://ccb.jhu.edu/software/stringtie/gff.shtml is a permanent redirect to its HTTPS counterpart https://ccb.jhu.edu/software/stringtie/gff.shtml and should be updated.
gffcompare sci-biology/gffcomparesci-biology@gentoo.org Homepage link http://ccb.jhu.edu/software/stringtie/gff.shtml is a permanent redirect to its HTTPS counterpart https://ccb.jhu.edu/software/stringtie/gff.shtml and should be updated.
gffread sci-biology/gffreadmmokrejs@fold.natur.cuni.cz Homepage link http://ccb.jhu.edu/software/stringtie/gff.shtml is a permanent redirect to its HTTPS counterpart https://ccb.jhu.edu/software/stringtie/gff.shtml and should be updated.
gffread sci-biology/gffreadsci-biology@gentoo.org Homepage link http://ccb.jhu.edu/software/stringtie/gff.shtml is a permanent redirect to its HTTPS counterpart https://ccb.jhu.edu/software/stringtie/gff.shtml and should be updated.
grappa sci-biology/grappasci-biology@gentoo.org Homepage link https://www.cs.unm.edu/~moret/GRAPPA/ is dead (connect timeout (60 seconds)) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
grappa sci-biology/grappasci-biology@gentoo.org Download link https://www.cs.unm.edu/~moret/GRAPPA/GRAPPA20.tar.gz is dead (connect timeout (60 seconds)) for more than a month and should be replaced by alive link (see other packages for hints).
irods sci-libs/iRODSsci-biology@gentoo.org Homepage link https://irods.org/ is dead (connect timeout (60 seconds)) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
irstlm sci-misc/irstlmpavel.a.denisov@gmail.com Homepage link https://hlt-mt.fbk.eu/technologies/irstlm is dead (DNS error: domain name not found) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
irstlm sci-misc/irstlmpavel.a.denisov@gmail.com Homepage link https://hlt-mt.fbk.eu/technologies/irstlm is dead (DNS error: domain name not found) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
jellyfish-k-mer sci-biology/jellyfishmmokrejs@fold.natur.cuni.cz Homepage link https://genome.umd.edu/jellyfish.html is dead (SSL error: incomplete certificate chain) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
jellyfish-k-mer sci-biology/jellyfishmmokrejs@fold.natur.cuni.cz Homepage link https://genome.umd.edu/jellyfish.html is dead (SSL error: incomplete certificate chain) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
jellyfish-k-mer sci-biology/jellyfishsci-biology@gentoo.org Homepage link https://genome.umd.edu/jellyfish.html is dead (SSL error: incomplete certificate chain) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
jellyfish-k-mer sci-biology/jellyfishsci-biology@gentoo.org Homepage link https://genome.umd.edu/jellyfish.html is dead (SSL error: incomplete certificate chain) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
kaks-calculator sci-biology/KaKs_Calculatormmokrejs@fold.natur.cuni.cz Homepage link https://www.sciencedirect.com/science/article/pii/S1672022910600083 is dead (HTTP 403) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
kaks-calculator sci-biology/KaKs_Calculatorsci-biology@gentoo.org Homepage link https://www.sciencedirect.com/science/article/pii/S1672022910600083 is dead (HTTP 403) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
libflame-amd sci-libs/libflame-amdgentoo@aisha.cc Homepage link https://developer.amd.com/amd-aocl/ is dead (connect timeout (60 seconds)) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
libflame-amd sci-libs/libflame-amdsci@gentoo.org Homepage link https://developer.amd.com/amd-aocl/ is dead (connect timeout (60 seconds)) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
libsufr sci-libs/libsufrgit@vandersluys.nl Homepage link http://libsufr.sourceforge.net/ is a permanent redirect to its HTTPS counterpart https://libsufr.sourceforge.net/ and should be updated.
libsufr sci-libs/libsufrsci@gentoo.org Homepage link http://libsufr.sourceforge.net/ is a permanent redirect to its HTTPS counterpart https://libsufr.sourceforge.net/ and should be updated.
libthesky sci-astronomy/libtheskygit@vandersluys.nl Homepage link http://libthesky.sourceforge.net/ is a permanent redirect to its HTTPS counterpart https://libthesky.sourceforge.net/ and should be updated.
libthesky sci-astronomy/libtheskysci-astronomy@gentoo.org Homepage link http://libthesky.sourceforge.net/ is a permanent redirect to its HTTPS counterpart https://libthesky.sourceforge.net/ and should be updated.
madgraph5 sci-physics/madgraph5alexander@neuwirth-informatik.de Download link https://launchpad.net/mg5amcnlo/3.0/3.5.x/+download/MG5_aMC_v3.5.3.tar.gz is dead (HTTP 404) for more than a month and should be replaced by alive link (see other packages for hints).
masurca sci-biology/MaSuRCAmmokrejs@fold.natur.cuni.cz Homepage link http://www.genome.umd.edu/masurca.html is dead (SSL error: incomplete certificate chain) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
masurca sci-biology/MaSuRCAmmokrejs@fold.natur.cuni.cz Homepage link http://bioinformatics.oxfordjournals.org/content/29/21/2669 is dead (HTTP 403) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
masurca sci-biology/MaSuRCAmmokrejs@fold.natur.cuni.cz Homepage link http://bioinformatics.oxfordjournals.org/content/29/21/2669 is dead (HTTP 403) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
masurca sci-biology/MaSuRCAmmokrejs@fold.natur.cuni.cz Homepage link http://www.genome.umd.edu/masurca.html is dead (SSL error: incomplete certificate chain) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
masurca sci-biology/MaSuRCAsci-biology@gentoo.org Homepage link http://bioinformatics.oxfordjournals.org/content/29/21/2669 is dead (HTTP 403) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
masurca sci-biology/MaSuRCAsci-biology@gentoo.org Homepage link http://www.genome.umd.edu/masurca.html is dead (SSL error: incomplete certificate chain) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
masurca sci-biology/MaSuRCAsci-biology@gentoo.org Homepage link http://bioinformatics.oxfordjournals.org/content/29/21/2669 is dead (HTTP 403) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
masurca sci-biology/MaSuRCAsci-biology@gentoo.org Homepage link http://www.genome.umd.edu/masurca.html is dead (SSL error: incomplete certificate chain) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
megahit sci-biology/megahitmmokrejs@fold.natur.cuni.cz Homepage link http://bioinformatics.oxfordjournals.org/content/31/10/1674.abstract is dead (HTTP 403) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
megahit sci-biology/megahitsci-biology@gentoo.org Homepage link http://bioinformatics.oxfordjournals.org/content/31/10/1674.abstract is dead (HTTP 403) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
mip-scaffolder sci-biology/mip-scaffoldermmokrejs@fold.natur.cuni.cz Download link http://www.cs.helsinki.fi/u/lmsalmel/mip-scaffolder/mip-scaffolder-0.6.tar.gz is a permanent redirect to its HTTPS counterpart https://www.cs.helsinki.fi/u/lmsalmel/mip-scaffolder/mip-scaffolder-0.6.tar.gz and should be updated.
mip-scaffolder sci-biology/mip-scaffoldersci-biology@gentoo.org Download link http://www.cs.helsinki.fi/u/lmsalmel/mip-scaffolder/mip-scaffolder-0.6.tar.gz is a permanent redirect to its HTTPS counterpart https://www.cs.helsinki.fi/u/lmsalmel/mip-scaffolder/mip-scaffolder-0.6.tar.gz and should be updated.
miranda-microrna sci-biology/mirandasci-biology@gentoo.org Download link http://cbio.mskcc.org/microrna_data/miRanda-aug2010.tar.gz is dead (HTTP 404) for more than a month and should be replaced by alive link (see other packages for hints).
mochiview sci-biology/MochiViewmmokrejs@fold.natur.cuni.cz Download link https://www.johnsonlab.ucsf.edu/s/MochiView_v146.zip is dead (DNS error: timeout while contacting DNS servers) for more than a month and should be replaced by alive link (see other packages for hints).
mochiview sci-biology/MochiViewmmokrejs@fold.natur.cuni.cz Homepage link https://www.johnsonlab.ucsf.edu/mochi.html is dead (DNS error: timeout while contacting DNS servers) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
mochiview sci-biology/MochiViewsci-biology@gentoo.org Homepage link https://www.johnsonlab.ucsf.edu/mochi.html is dead (DNS error: timeout while contacting DNS servers) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
mochiview sci-biology/MochiViewsci-biology@gentoo.org Download link https://www.johnsonlab.ucsf.edu/s/MochiView_v146.zip is dead (DNS error: timeout while contacting DNS servers) for more than a month and should be replaced by alive link (see other packages for hints).
motioncor2 sci-chemistry/MotionCor2alexxy@gentoo.org Homepage link https://emcore.ucsf.edu/ucsf-motioncor2 is dead (DNS error) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
motioncor2 sci-chemistry/MotionCor2sci-chemistry@gentoo.org Homepage link https://emcore.ucsf.edu/ucsf-motioncor2 is dead (DNS error) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
mrfast sci-biology/mrfastsci-biology@gentoo.org Homepage link http://mrfast.sourceforge.net/ is a permanent redirect to its HTTPS counterpart https://mrfast.sourceforge.net/ and should be updated.
msautil sci-biology/msautilmmokrejs@fold.natur.cuni.cz Homepage link http://bioresearch.byu.edu/msa is dead (connect timeout (60 seconds)) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
msautil sci-biology/msautilmmokrejs@fold.natur.cuni.cz Download link http://bioresearch.byu.edu/msa/msautil-1.1.tgz is dead (connect timeout (60 seconds)) for more than a month and should be replaced by alive link (see other packages for hints).
msautil sci-biology/msautilsci-biology@gentoo.org Homepage link http://bioresearch.byu.edu/msa is dead (connect timeout (60 seconds)) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
msautil sci-biology/msautilsci-biology@gentoo.org Download link http://bioresearch.byu.edu/msa/msautil-1.1.tgz is dead (connect timeout (60 seconds)) for more than a month and should be replaced by alive link (see other packages for hints).
museqbox sci-biology/MuSeqBoxmmokrejs@fold.natur.cuni.cz Homepage link http://brendelgroup.org/bioinformatics2go/MuSeqBox.php is a permanent redirect to its HTTPS counterpart https://brendelgroup.org/bioinformatics2go/MuSeqBox.php and should be updated.
museqbox sci-biology/MuSeqBoxmmokrejs@fold.natur.cuni.cz Download link http://www.brendelgroup.org/bioinformatics2go/Download/MuSeqBox-5-7-2021.tar.gz is dead (HTTP 404) for more than a month and should be replaced by alive link (see other packages for hints).
museqbox sci-biology/MuSeqBoxsci-biology@gentoo.org Download link http://www.brendelgroup.org/bioinformatics2go/Download/MuSeqBox-5-7-2021.tar.gz is dead (HTTP 404) for more than a month and should be replaced by alive link (see other packages for hints).
museqbox sci-biology/MuSeqBoxsci-biology@gentoo.org Homepage link http://brendelgroup.org/bioinformatics2go/MuSeqBox.php is a permanent redirect to its HTTPS counterpart https://brendelgroup.org/bioinformatics2go/MuSeqBox.php and should be updated.
ngsepcore sci-biology/NGSEPcore-binmmokrejs@fold.natur.cuni.cz Download link https://sourceforge.net/projects/ngsep/files/Library/NGSEPcore_4.0.3.jar is dead (HTTP 404) for more than a month and should be replaced by alive link (see other packages for hints).
ngsepcore sci-biology/NGSEPcore-binmmokrejs@fold.natur.cuni.cz Download link https://sourceforge.net/projects/ngsep/files/training/ManualNGSEP_v4.0.3.pdf is dead (HTTP 404) for more than a month and should be replaced by alive link (see other packages for hints).
ngsepcore sci-biology/NGSEPcore-binsci-biology@gentoo.org Download link https://sourceforge.net/projects/ngsep/files/Library/NGSEPcore_4.0.3.jar is dead (HTTP 404) for more than a month and should be replaced by alive link (see other packages for hints).
ngsepcore sci-biology/NGSEPcore-binsci-biology@gentoo.org Download link https://sourceforge.net/projects/ngsep/files/training/ManualNGSEP_v4.0.3.pdf is dead (HTTP 404) for more than a month and should be replaced by alive link (see other packages for hints).
ocaml:lacaml dev-ml/lacamlsci@gentoo.org Homepage link https://bitbucket.org/mmottl/lacaml is dead (HTTP 404) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
openfst sci-misc/openfstflammie@gentoo.org Download link http://www.openfst.org/twiki/pub/FST/FstDownload/openfst-1.8.2.tar.gz is a permanent redirect to its HTTPS counterpart https://www.openfst.org/twiki/pub/FST/FstDownload/openfst-1.8.2.tar.gz and should be updated.
openfst sci-misc/openfstflammie@gentoo.org Homepage link http://www.openfst.org/ is a permanent redirect to its HTTPS counterpart https://www.openfst.org/ and should be updated.
openfst sci-misc/openfstsci@gentoo.org Homepage link http://www.openfst.org/ is a permanent redirect to its HTTPS counterpart https://www.openfst.org/ and should be updated.
openfst sci-misc/openfstsci@gentoo.org Download link http://www.openfst.org/twiki/pub/FST/FstDownload/openfst-1.8.2.tar.gz is a permanent redirect to its HTTPS counterpart https://www.openfst.org/twiki/pub/FST/FstDownload/openfst-1.8.2.tar.gz and should be updated.
opfvta-bidsdata sci-biology/opfvta_bidsdatagentoo@chymera.eu Homepage link http://chymera.eu/docs/focus/open-science/ is a permanent redirect to its HTTPS counterpart https://chymera.eu/docs/focus/open-science/ and should be updated.
opfvta-bidsdata sci-biology/opfvta_bidsdatasci@gentoo.org Homepage link http://chymera.eu/docs/focus/open-science/ is a permanent redirect to its HTTPS counterpart https://chymera.eu/docs/focus/open-science/ and should be updated.
pairagon sci-biology/pairagonmmokrejs@fold.natur.cuni.cz Homepage link https://mblab.wustl.edu/software.html is dead (SSL error: self signed certificate) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
pairagon sci-biology/pairagonsci-biology@gentoo.org Homepage link https://mblab.wustl.edu/software.html is dead (SSL error: self signed certificate) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
paraat sci-biology/ParaATmmokrejs@fold.natur.cuni.cz Homepage link http://cbb.big.ac.cn/software is dead (server disconnected) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
paraat sci-biology/ParaATmmokrejs@fold.natur.cuni.cz Homepage link https://www.sciencedirect.com/science/article/pii/S0006291X12003518 is dead (HTTP 403) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
paraat sci-biology/ParaATsci-biology@gentoo.org Homepage link https://www.sciencedirect.com/science/article/pii/S0006291X12003518 is dead (HTTP 403) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
paraat sci-biology/ParaATsci-biology@gentoo.org Homepage link http://cbb.big.ac.cn/software is dead (server disconnected) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
perl:btlib dev-perl/BTLibsci-biology@gentoo.org Homepage link https://sourceforge.net/projects/downloads/ is dead (HTTP 404) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
perl:btlib dev-perl/BTLibsci-biology@gentoo.org Homepage link https://sourceforge.net/projects/downloads/ is dead (HTTP 404) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
perl:log-cabin dev-perl/Log-Cabinmmokrejs@fold.natur.cuni.cz Homepage link https://metacpan.org/release/Log-Cabin is dead (HTTP 503) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
perl:log-cabin dev-perl/Log-Cabinsci-biology@gentoo.org Homepage link https://metacpan.org/release/Log-Cabin is dead (HTTP 503) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
perlprimer sci-biology/perlprimersci-biology@gentoo.org Homepage link http://perlprimer.sourceforge.net/ is a permanent redirect to its HTTPS counterpart https://perlprimer.sourceforge.net/ and should be updated.
pg2plplot sci-libs/pg2plplotastrofloyd@gmail.com Homepage link http://pg2plplot.sourceforge.net/ is a permanent redirect to its HTTPS counterpart https://pg2plplot.sourceforge.net/ and should be updated.
pg2plplot sci-libs/pg2plplotsci@gentoo.org Homepage link http://pg2plplot.sourceforge.net/ is a permanent redirect to its HTTPS counterpart https://pg2plplot.sourceforge.net/ and should be updated.
pileup sci-biology/pileupmmokrejs@fold.natur.cuni.cz Homepage link https://www.sanger.ac.uk/resources/software/ssaha2/ is dead (HTTP 404) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
pileup sci-biology/pileupsci-biology@gentoo.org Homepage link https://www.sanger.ac.uk/resources/software/ssaha2/ is dead (HTTP 404) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
portrait sci-biology/portraitmmokrejs@fold.natur.cuni.cz Download link http://bioinformatics.cenargen.embrapa.br/portrait/download/portrait.tar.gz is dead (HTTP 404) for more than a month and should be replaced by alive link (see other packages for hints).
portrait sci-biology/portraitmmokrejs@fold.natur.cuni.cz Homepage link http://bioinformatics.cenargen.embrapa.br/portrait is dead (HTTP 404) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
portrait sci-biology/portraitsci-biology@gentoo.org Download link http://bioinformatics.cenargen.embrapa.br/portrait/download/portrait.tar.gz is dead (HTTP 404) for more than a month and should be replaced by alive link (see other packages for hints).
portrait sci-biology/portraitsci-biology@gentoo.org Homepage link http://bioinformatics.cenargen.embrapa.br/portrait is dead (HTTP 404) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
praat sci-misc/praatflammie@gentoo.org Homepage link http://www.fon.hum.uva.nl/praat/ is a permanent redirect to its HTTPS counterpart https://www.fon.hum.uva.nl/praat/ and should be updated.
prinseq-lite sci-biology/prinseq-litemmokrejs@fold.natur.cuni.cz Homepage link http://prinseq.sourceforge.net/ is a permanent redirect to its HTTPS counterpart https://prinseq.sourceforge.net/ and should be updated.
prinseq-lite sci-biology/prinseq-litesci-biology@gentoo.org Homepage link http://prinseq.sourceforge.net/ is a permanent redirect to its HTTPS counterpart https://prinseq.sourceforge.net/ and should be updated.
python:dask-awkward dev-python/dask-awkwardalexander@neuwirth-informatik.de Homepage link https://github.com/dask-contirb/dask-awkward is dead (HTTP 404) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
python:dask-awkward dev-python/dask-awkwardalexander@neuwirth-informatik.de Homepage link https://github.com/dask-contirb/dask-awkward is dead (HTTP 404) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
python:dask-awkward dev-python/dask-awkwardsci@gentoo.org Homepage link https://github.com/dask-contirb/dask-awkward is dead (HTTP 404) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
python:dask-awkward dev-python/dask-awkwardsci@gentoo.org Homepage link https://github.com/dask-contirb/dask-awkward is dead (HTTP 404) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
python:dask-histogram dev-python/dask-histogramalexander@neuwirth-informatik.de Homepage link https://github.com/dask-contirb/dask-histogram is dead (HTTP 404) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
python:dask-histogram dev-python/dask-histogramsci@gentoo.org Homepage link https://github.com/dask-contirb/dask-histogram is dead (HTTP 404) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
python:numdifftools dev-python/numdifftoolsalexander@neuwirth-informatik.de Homepage link https://github.com/pbord/numdifftools is dead (HTTP 404) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
python:numdifftools dev-python/numdifftoolssci@gentoo.org Homepage link https://github.com/pbord/numdifftools is dead (HTTP 404) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
qcdloop sci-physics/qcdloopalexander@neuwirth-informatik.de Homepage link https://qcdloop.web.cern.ch/qcdloop/ is dead (HTTP 404) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
qcdloop sci-physics/qcdloopalexander@neuwirth-informatik.de Homepage link https://qcdloop.web.cern.ch/qcdloop/ is dead (HTTP 404) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
qcdloop sci-physics/qcdloopalexander@neuwirth-informatik.de Homepage link https://qcdloop.web.cern.ch/qcdloop/ is dead (HTTP 404) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
qcdloop sci-physics/qcdloopsci-physics@gentoo.org Homepage link https://qcdloop.web.cern.ch/qcdloop/ is dead (HTTP 404) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
qcdloop sci-physics/qcdloopsci-physics@gentoo.org Homepage link https://qcdloop.web.cern.ch/qcdloop/ is dead (HTTP 404) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
qcdloop sci-physics/qcdloopsci-physics@gentoo.org Homepage link https://qcdloop.web.cern.ch/qcdloop/ is dead (HTTP 404) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
qgraf sci-physics/qgrafalexander@neuwirth-informatik.de Homepage link http://cfif.ist.utl.pt/~paulo/qgraf.html is dead (DNS error: domain name not found) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
qgraf sci-physics/qgrafalexander@neuwirth-informatik.de Homepage link http://cfif.ist.utl.pt/~paulo/qgraf.html is dead (DNS error: domain name not found) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
qgraf sci-physics/qgrafalexander@neuwirth-informatik.de Homepage link http://cfif.ist.utl.pt/~paulo/qgraf.html is dead (DNS error: domain name not found) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
qgraf sci-physics/qgrafalexander@neuwirth-informatik.de Homepage link http://cfif.ist.utl.pt/~paulo/qgraf.html is dead (DNS error: domain name not found) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
qgraf sci-physics/qgrafsci-physics@gentoo.org Homepage link http://cfif.ist.utl.pt/~paulo/qgraf.html is dead (DNS error: domain name not found) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
qgraf sci-physics/qgrafsci-physics@gentoo.org Homepage link http://cfif.ist.utl.pt/~paulo/qgraf.html is dead (DNS error: domain name not found) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
qgraf sci-physics/qgrafsci-physics@gentoo.org Homepage link http://cfif.ist.utl.pt/~paulo/qgraf.html is dead (DNS error: domain name not found) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
qgraf sci-physics/qgrafsci-physics@gentoo.org Homepage link http://cfif.ist.utl.pt/~paulo/qgraf.html is dead (DNS error: domain name not found) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
samstat sci-biology/samstatmmokrejs@fold.natur.cuni.cz Homepage link http://samstat.sourceforge.net/ is a permanent redirect to its HTTPS counterpart https://samstat.sourceforge.net/ and should be updated.
samstat sci-biology/samstatsci-biology@gentoo.org Homepage link http://samstat.sourceforge.net/ is a permanent redirect to its HTTPS counterpart https://samstat.sourceforge.net/ and should be updated.
scifio-jai-imageio media-libs/scifio-jai-imageiosci@gentoo.org Homepage link http://jai-imageio.dev.java.net/ is dead (SSL error: certificate issued for different hostname) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
scifio-jai-imageio media-libs/scifio-jai-imageiosci@gentoo.org Homepage link http://jai-imageio.dev.java.net/ is dead (SSL error: certificate issued for different hostname) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
seqtools sci-biology/seqtoolsmmokrejs@fold.natur.cuni.cz Homepage link http://www.sanger.ac.uk/resources/software/seqtools is a permanent redirect to its HTTPS counterpart https://www.sanger.ac.uk/resources/software/seqtools and should be updated.
seqtools sci-biology/seqtoolssci-biology@gentoo.org Homepage link http://www.sanger.ac.uk/resources/software/seqtools is a permanent redirect to its HTTPS counterpart https://www.sanger.ac.uk/resources/software/seqtools and should be updated.
skewer sci-biology/skewer-binmmokrejs@fold.natur.cuni.cz Homepage link https://sourceforge.net/projects/skewer needs a trailing slash added, otherwise there's a javascript redirect.
skewer sci-biology/skewer-binsci-biology@gentoo.org Homepage link https://sourceforge.net/projects/skewer needs a trailing slash added, otherwise there's a javascript redirect.
solexaqa sci-biology/SolexaQAmmokrejs@fold.natur.cuni.cz Homepage link https://sourceforge.net/projects/solexaqa needs a trailing slash added, otherwise there's a javascript redirect.
solexaqa sci-biology/SolexaQAsci-biology@gentoo.org Homepage link https://sourceforge.net/projects/solexaqa needs a trailing slash added, otherwise there's a javascript redirect.
spades sci-biology/SPAdesmmokrejs@fold.natur.cuni.cz Homepage link https://cab.spbu.ru/software/spades is dead (DNS error: no address record) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
spades sci-biology/SPAdesmmokrejs@fold.natur.cuni.cz Download link https://cab.spbu.ru/files/release3.15.5/manual.html is dead (DNS error: no address record) for more than a month and should be replaced by alive link (see other packages for hints).
spades sci-biology/SPAdesmmokrejs@fold.natur.cuni.cz Download link https://cab.spbu.ru/files/release3.15.5/rnaspades_manual.html is dead (DNS error: no address record) for more than a month and should be replaced by alive link (see other packages for hints).
spades sci-biology/SPAdesmmokrejs@fold.natur.cuni.cz Download link https://cab.spbu.ru/files/release3.15.5/truspades_manual.html is dead (DNS error: no address record) for more than a month and should be replaced by alive link (see other packages for hints).
spades sci-biology/SPAdessci-biology@gentoo.org Download link https://cab.spbu.ru/files/release3.15.5/truspades_manual.html is dead (DNS error: no address record) for more than a month and should be replaced by alive link (see other packages for hints).
spades sci-biology/SPAdessci-biology@gentoo.org Homepage link https://cab.spbu.ru/software/spades is dead (DNS error: no address record) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
spades sci-biology/SPAdessci-biology@gentoo.org Download link https://cab.spbu.ru/files/release3.15.5/manual.html is dead (DNS error: no address record) for more than a month and should be replaced by alive link (see other packages for hints).
spades sci-biology/SPAdessci-biology@gentoo.org Download link https://cab.spbu.ru/files/release3.15.5/rnaspades_manual.html is dead (DNS error: no address record) for more than a month and should be replaced by alive link (see other packages for hints).
ssaha2 sci-biology/ssaha2-binmmokrejs@fold.natur.cuni.cz Homepage link https://www.sanger.ac.uk/tool/ssaha2-0/ is dead (HTTP 404) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
ssaha2 sci-biology/ssaha2-binsci-biology@gentoo.org Homepage link https://www.sanger.ac.uk/tool/ssaha2-0/ is dead (HTTP 404) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
stacks sci-biology/stacksmmokrejs@fold.natur.cuni.cz Download link http://creskolab.uoregon.edu/stacks/source/stacks-2.60.tar.gz is a permanent redirect to its HTTPS counterpart https://creskolab.uoregon.edu/stacks/source/stacks-2.60.tar.gz and should be updated.
stacks sci-biology/stacksmmokrejs@fold.natur.cuni.cz Homepage link http://creskolab.uoregon.edu/stacks is a permanent redirect to its HTTPS counterpart https://creskolab.uoregon.edu/stacks and should be updated.
stacks sci-biology/stackssci-biology@gentoo.org Download link http://creskolab.uoregon.edu/stacks/source/stacks-2.60.tar.gz is a permanent redirect to its HTTPS counterpart https://creskolab.uoregon.edu/stacks/source/stacks-2.60.tar.gz and should be updated.
stacks sci-biology/stackssci-biology@gentoo.org Homepage link http://creskolab.uoregon.edu/stacks is a permanent redirect to its HTTPS counterpart https://creskolab.uoregon.edu/stacks and should be updated.
starparse sci-libs/starparsesci@gentoo.org Homepage link http://burrow-owl.sourceforge.net/ is a permanent redirect to its HTTPS counterpart https://burrow-owl.sourceforge.net/ and should be updated.
stringtie sci-biology/stringtiemmokrejs@fold.natur.cuni.cz Download link https://github.com/gpertea/stringtie/releases/download/v2.1.5/stringtie-2.1.5.tar.gz is dead (HTTP 404) for more than a month and should be replaced by alive link (see other packages for hints).
stringtie sci-biology/stringtiesci-biology@gentoo.org Download link https://github.com/gpertea/stringtie/releases/download/v2.1.5/stringtie-2.1.5.tar.gz is dead (HTTP 404) for more than a month and should be replaced by alive link (see other packages for hints).
subread sci-biology/subreadmmokrejs@fold.natur.cuni.cz Homepage link http://bioinf.wehi.edu.au/featureCounts/ is dead (HTTP 404) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
subread sci-biology/subreadsci-biology@gentoo.org Homepage link http://bioinf.wehi.edu.au/featureCounts/ is dead (HTTP 404) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
swissknife sci-biology/swissknifesci-biology@gentoo.org Homepage link http://swissknife.sourceforge.net/ is a permanent redirect to its HTTPS counterpart https://swissknife.sourceforge.net/ and should be updated.
tagdust sci-biology/tagdustmmokrejs@fold.natur.cuni.cz Homepage link http://genome.gsc.riken.jp/osc/english/dataresource is dead (connection refused) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
tagdust sci-biology/tagdustmmokrejs@fold.natur.cuni.cz Download link http://genome.gsc.riken.jp/osc/english/software/src/tagdust.tgz is dead (connection refused) for more than a month and should be replaced by alive link (see other packages for hints).
tagdust sci-biology/tagdustsci-biology@gentoo.org Homepage link http://genome.gsc.riken.jp/osc/english/dataresource is dead (connection refused) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
tagdust sci-biology/tagdustsci-biology@gentoo.org Download link http://genome.gsc.riken.jp/osc/english/software/src/tagdust.tgz is dead (connection refused) for more than a month and should be replaced by alive link (see other packages for hints).
trf-tandem-repeats-finder sci-biology/trf-binsci-biology@gentoo.org Download link http://tandem.bu.edu/trf/downloads/trf409.linux64 is dead (HTTP 404) for more than a month and should be replaced by alive link (see other packages for hints).
trf-tandem-repeats-finder sci-biology/trf-binsci-biology@gentoo.org Homepage link http://tandem.bu.edu/trf/trf.html is a permanent redirect to its HTTPS counterpart https://tandem.bu.edu/trf/trf.html and should be updated.
trf-tandem-repeats-finder sci-biology/trf-binsci-biology@gentoo.org Download link http://tandem.bu.edu/trf/downloads/trf409.linux32 is dead (HTTP 404) for more than a month and should be replaced by alive link (see other packages for hints).
twinscan sci-biology/twinscansci-biology@gentoo.org Homepage link https://mblab.wustl.edu/software.html is dead (SSL error: self signed certificate) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
ugene sci-biology/ugenealexxy@gentoo.org Homepage link http://ugene.unipro.ru/ is dead (connect timeout (60 seconds)) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
ugene sci-biology/ugenesci@gentoo.org Homepage link http://ugene.unipro.ru/ is dead (connect timeout (60 seconds)) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
vague sci-biology/vague-binmmokrejs@fold.natur.cuni.cz Download link https://vicbioinformatics.com/vague-1.0.5.tar.gz is dead (connect timeout (60 seconds)) for more than a month and should be replaced by alive link (see other packages for hints).
vague sci-biology/vague-binmmokrejs@fold.natur.cuni.cz Homepage link https://vicbioinformatics.com/software.vague.shtml is dead (connect timeout (60 seconds)) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
vague sci-biology/vague-binsci-biology@gentoo.org Homepage link https://vicbioinformatics.com/software.vague.shtml is dead (connect timeout (60 seconds)) for more than a month and should be replaced by alive link (see other packages for hints, or link to archive.org as a last resort).
vague sci-biology/vague-binsci-biology@gentoo.org Download link https://vicbioinformatics.com/vague-1.0.5.tar.gz is dead (connect timeout (60 seconds)) for more than a month and should be replaced by alive link (see other packages for hints).
varscan sci-biology/VarScansci@gentoo.org Homepage link http://varscan.sourceforge.net/ is a permanent redirect to its HTTPS counterpart https://varscan.sourceforge.net/ and should be updated.