34 project(s) on this page
| Project | In Homebrew tap Brewsci/bio | Spread | Newest | Outdated | Ignored |
|---|---|---|---|---|---|
| beast2 | 2.5.0 | 3 | 2.5.1 | 2.4.7 2.4.4 | |
| cap3 | 2015-02-11 | 2 | 20091029 | ||
| centrifuge | 1.0.3 | 3 | 1.0.4 | 1.0.3 1.0.3beta | |
| cutadapt∗ | 1.16 | 3 | 1.18 | 1.14 | |
| edirect∗ | 9.70 | 2 | 10.2 | ||
| exonerate | 2.2.0 | 9 | 2.4.06 | 2.2.03 | |
| fastp | 0.19.5 | 3 | 0.19.6 | 0.14.1 | |
| figtree | 1.4.3 | 5 | 1.4.43 | 1.4.3 1.4.22 1.4 1.3.1 | |
| finch-rs | 0.1.8 | 2 | 0.1.9 | ||
| gappa∗ | 0.2.0 | 3 | 1.3.3 | 1.3.2 1.3.1 1.2 | |
| gemma | 0.98 | 3 | 0.98.1 | 0.98 0.97 | |
| hmmer | 2.4i | 13 | 3.2.17 | 3.1b24 3.1beta2 3.1_beta2 3.1b1 3.03 3 2.4i 2.3.22 | |
| iqtree | 1.6.8 | 4 | 1.6.10 | 1.6.92 1.6.5 1.6.1 1.5.5 1.5.3 1.3.11.1 | |
| iva | 1.0.8 | 3 | 1.0.9 | 1.0.8 0.10.1 | |
| last | 926 | 4 | 9632 | 938 921 869 830 712 490 393 299 230 189 | |
| libpll | 0.3.2 | 3 | 1.0.11 | 0.3.2 0.3.1 | |
| minced | 0.3.0 | 2 | 0.3.2 | ||
| mothur | 1.40.3 | 4 | 1.41.21 | 1.41.3 1.40.5 1.40.3 1.39.5 1.38.1.1 1.36.1 1.33.3 1.31.2 1.27.0 1.22.2 | |
| nanopolish | 0.10.2 | 3 | 0.11.0 | 0.10.22 0.9.0 0.5.0 0.4.0 | |
| paml∗ | 4.9h | 8 | 4.9i | 4.9h3 4.9g 4.9e2 4.8 4.7 4.5 4.4e 4.4c | |
| pilon | 1.22 | 2 | 1.23 | 1.22 | |
| porechop | 0.2.3 | 3 | 0.2.4 | 0.2.3 | |
| prokka | 1.13 | 2 | 1.13.4 | ||
| python:matplotlib∗ | 2.2.3 | 32 | 3.0.39 | 3.0.24 3.0.1 3.0.0 2.2.44 2.2.313 2.2.26 2.2.1 2.2.0 2.1.23 2.1.12 2.1.0 2.0.22 2.0.1 2.0.04 1.5.34 1.5.2 1.5.15 1.5.02 1.4.32 1.4.22 1.4.1 1.4.0 1.3.13 1.3.0 1.2.1 1.2.04 1.1.1rc1.git20120423 1.0.0 0.99.1.23 | 9999 r26679.b9b02f189 |
| racon | 1.3.1 | 2 | 1.3.2 | 1.3.1 | |
| repeatmasker∗ | 4.0.7 | 4 | 4.0.8 | 4.0.5 4.0.1 | |
| salmid | 0.122 | 2 | 0.1.23 | ||
| salmon | 0.9.1 | 4 | 0.13.1 | 0.12.0 0.9.1 0.7.2 | |
| snp-sites | 2.4.0 | 2 | 2.4.1 | 2.4.0 2.3.3 2.3.2 2.1.3 1.5.0 | |
| sortmerna | 2.1 | 3 | 2.1b | 2.1 2.0 | |
| stringtie | 1.3.4d | 4 | 1.3.5 | 1.3.4.d 1.2.1 | |
| transdecoder | 5.3.0 | 3 | 5.4.0 | 5.0.1 3.0.1 2.0.1 | |
| viennarna | 2.4.3 | 2 | 2.4.11 | ||
| vsearch | 2.9.0 | 4 | 2.10.4 | 2.10.3 2.9.1 2.8.0 2.7.1 2.4.3 2.3.4 1.1.3 |
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