72 project(s) on this page
| Project | Selected | Spr | Newest | Outdated | Ignored |
|---|---|---|---|---|---|
| abacas∗ | 1.3.1 | 3 | 1.3.12 | ||
| apbspdb2pqr∗ | 1.5 | 1 | |||
| art∗ | 20160605 | 5 | 2.0.1 2.0 1.12.1 1.10.1 0.9.02 | ||
| ascp∗ | 3.7.7 | 1 | |||
| bbtools∗ | 38.87 | 2 | 38.96 | 1.9 | |
| bcalm∗ | 2.2.2 | 3 | 2.2.3 | 2.2.1 | 2.2.0.r49.g890ea4a |
| bioperl∗ | 1.007002 | 6 | 1.7.83 | 1.7.73 1.7.2 1.7.1 1.6.924 1.6.923 1.6.901 1.6.9 | 9999 |
| bowtie∗ | 1.3.0 | 13 | 1.3.14 | 1.3.08 1.2.34 1.2.2 1.1.22 1.1.1 1.0.1 1.0.0 0.12.72 | |
| circos∗ | 0.69-9 | 7 | 0.69_9 0.69.9 0.69-9 | 0.69.6 0.69-6 0.69.4 0.69 0.66 0.64 0.552 0.49 | |
| clipper4coot∗ | 2.1.20180802 | 1 | |||
| clustal-omega∗ | 1.2.4 | 11 | 1.2.410 | 1.2.1 | |
| clustalw∗ | 2.1 | 14 | 2.111 | 1.832 | 2.1+lgpl 2.1+lgpl |
| cutadapt∗ | 3.3 | 4 | 3.3 | 2.10 2.1 1.14 | |
| delly∗ | 0.8.5 | 5 | 1.0.32 | 0.9.12 0.8.72 0.8.3 0.8.2 0.8.1 | |
| dida∗ | 1.0.1 | 3 | 1.0.11 | 1.0.4 | 1.0.4.r5.gbcb26e5 4.2.1.0 4.2.0.0 4.1.5.0 4.1.4.0 4.1.3.6 4.1.3.0 4.1.2.6 4.1.2.0 4.1.1.0 4.0.5.2 3.9.1.0 3.7.8.8 |
| discovardenovo∗ | 52488 | 2 | 52488 | ||
| dssp∗ | 3.1.4 | 8 | 4.0.42 | 4.0.3 4.0.0 3.1.44 3.0.11 3.0.02 2.2.13 | |
| edirect∗ | 13.8 | 2 | 13.3.20200128 | ||
| emboss∗ | 6.6.0 | 15 | 6.6.011 | 6.5.7 6.4.0 6.3.1 6.0.1 | |
| falco∗ | 0.2.4 | 2 | 0.31.0 | 0.29.1 | 0.30.0.r0.gbb811332 |
| finch-rs∗ | 0.3.0 | 2 | 0.4.1 | ||
| flash-seq∗ | 1.2.11 | 5 | 1.2.114 | ||
| flye∗ | 2.8.3 | 1 | |||
| gffcompare∗ | 0.12.1 | 4 | 0.12.6 | 0.12.2 0.10.15-1.be56ef4 | |
| gmap-gsnap∗ | 2019-09-12 | 3 | 2019.03.15 | 2021-03-08 | |
| groot∗ | 1.1.2 | 2 | 18.8 | ||
| hh-suite∗ | 3.3.0 | 1 | |||
| hssp∗ | 3.1.5 | 3 | 3.1.5 | 3.0.10 | |
| humann2∗ | 0.11.1 | 1 | |||
| iqtree∗ | 1.6.12 | 5 | 2.1.2 | 2.0.7 2.0.6 1.6.122 1.6.9 1.6.1 1.5.3 1.3.11.1 | |
| iqtree2∗ | 2.0.7 | 2 | 2.1.3 | ||
| kent-tools∗ | 401 | 1 | |||
| kraken∗ | 1.1.1 | 7 | 2.1.1 | 1.1.13 1.12 1.0 0.10.5~beta 0.1 | r70.2c5f7ce 32.368a837 |
| kraken2∗ | 2.1.1 | 5 | 2.1.22 | 2.1.13 2.0.8~beta | |
| libccp4∗ | 6.5.1 | 8 | 6.5.15 | 6.4.62 6.4.5 6.4.0_rc1 | r1861 |
| magic-blast∗ | 1.3.0 | 1 | |||
| meme-motif-discovery∗ | 5.1.0 | 5 | 5.3.3 | 5.3.0 5.2.0 4.11.2_p2 | |
| minia∗ | 3.2.1 | 4 | 3.2.6 | 3.2.1+git20200522.4960a99 3.2.1 1.6906 1.6088 1.6067 | 3.2.1.r12.g5b131b9 |
| minimap2∗ | 2.17 | 9 | 2.247 | 2.23 2.22 2.20 2.172 2.15 2.14 | 2.17.r46.gc9874e2 |
| mmdb2∗ | 2.0.20 | 5 | 2.0.203 | 2.0.1 | 2.0.22 |
| mmtf-cpp∗ | 1.0.0 | 14 | 1.0.013 | ||
| mp-est∗ | 2.0 | 1 | |||
| mrbayes∗ | 3.2.7 | 8 | 3.2.7a4 | 3.2.74 3.2.6 3.2.3 3.2.2 3.1.23 | |
| mummer∗ | 3.23 | 7 | 3.234 | 3.22 3.20 | 4.0.0.b2.2 |
| nanofilt∗ | 2.7.1 | 2 | 2.6.0 | ||
| ncbi-blast+∗ | 2.2.31 2.2.26 | 15 | 2.13.04 | 2.12.04 2.11.06 2.10.1 2.9.02 2.8.12 2.7.1 2.6.02 2.2.313 2.2.30 2.2.292 2.2.28 2.2.27 2.2.262 2.2.25 | |
| ngmaster∗ | 0.5.6 | 1 | |||
| paml∗ | 4.9j | 10 | 4.10.1 | 4.9j6 4.9h2 4.9g 4.9e 4.8 4.7 4.4e 4.4c | |
| phyml∗ | 3.3.20200621 | 8 | 3.3.202204082 | 3.3.202112312 3.3.202006214 3.3.20190909 3.3.20180621 3.3.20170530 3.2.0 2.4.5 | r121.ab59039 201204122 20110919 |
| plink∗ | 1.90b5 | 10 | 1.90.b6.17 1.076 | 1.90~b6.16-200217 1.90~b6.6-181012 1.90~b5.2-180109 1.90~b3.45-170113 1.90~b3.31-160203 1.90b3 1.9-beta6.10 v1.90b6.26 | 1.9.r40.gdcc7785a 1.90_pre140514 1.90~b6.24-211108 1.90~b6.21-201019 |
| Project | Selected | Spr | Newest | Outdated | Ignored |
| pymol∗ | 2.4.0 | 19 | 2.5.011 | 2.4.1 2.4.05 2.3.3 2.3.07 2.2.02 2.1.0 1.9.0.0.svn4184 1.8.6.0 1.8.6 1.8.4.02 1.7.7.1.svn4131 1.7.4.0 1.7.2.1 1.7.0.0 1.4.12 | r4806.c7095ec2 20220504-8b553202 2.5.2 2.5.1 |
| python:matplotlib∗ | 3.3.4 | 40 | 3.5.212 | 3.5.114 3.5.02 3.4.37 3.4.24 3.4.1 3.3.44 3.3.34 3.3.2 3.3.1 3.2.22 3.2.14 3.1.3 3.1.22 3.1.1 3.0.33 3.0.2 2.2.56 2.2.43 2.2.35 2.2.22 2.1.2 2.1.1 2.0.2 2.0.02 1.5.13 1.4.3 1.4.2 1.3.12 1.2.1 1.2.02 1.1.1~rc1+git20120423 0.99.1.22 | r26679.b9b02f189 |
| raptor∗ | 1.1.0 | 39 | 2.0.1539 | 2.0.14.1 2.0.14 2.0.13 2.0.92 2.0.8 2.0.6 2.0.3 2.0.2 2.0.0 1.4.2112 1.4.20 1.4.19 1.4.18 0~git20211220.754cdbf | |
| rasusa∗ | 0.3.0 | 1 | |||
| raxml∗ | 8.2.12 | 9 | 8.2.127 | 8.2.11 8.2.9 8.2.4 8.1.1 7.2.8 7.2.6 | |
| repeatmasker∗ | 4.0.7 | 4 | 4.1.2_p1 4.1.2-p1 | 4.0.1 | |
| rmblast∗ | 2.2.28 | 3 | 2.2.28 | 1.2 | |
| ruby:rails∗ | 1.5.1▲ | 21 | 7.0.33 | 7.0.2.44 7.0.2.34 7.0.2.2 7.0.1▲ 6.1.62 6.1.5.12 6.1.5 6.1.4.7 6.1.4.6 6.1.4.4▲ 6.1.4.1▲4 6.1.4▲ 6.1.3.2▲2 6.1.3▲ 6.1.2.1▲ 6.0.52 6.0.4.82 6.0.4.7 6.0.4.4▲ 6.0.4.1▲2 6.0.3.7▲ 6.0.3.5▲ 6.0.3.4▲ 6.0.3.3▲ 6.0.2.2▲ 5.2.82 5.2.7.12 5.2.7 5.2.6▲2 5.2.4.4▲ 5.2.4.3▲ 5.2.4.1▲ 5.2.3▲4 5.2.2.1▲ 5.2.2▲ 5.2.1▲2 5.1.7▲2 5.1.6▲ 5.1.5▲ 5.1.4▲2 5.0.7.2▲ 5.0.2▲ 4.2.11.3▲ 4.2.11.1▲ 4.2.10▲ 4.2.7.1▲ 4.2.6▲2 4.2.5.1▲ 4.2.4▲ 4.1.8▲ 4.1.1▲ 4.0.2▲ 3.2.19▲ 3.2.18▲ 3.2.16▲ 3.2.13+1▲ 3.0.5▲ 2.3.14.1▲ 2.3.14▲ 2.3.5▲ 1.5.1▲ 1.1.6▲ | |
| sdsl-lite∗ | 2.1.1 | 7 | 3.0.0 | 2.1.14 2.0.3 v2.1.1.r132.gddb0fbbc | |
| slim-simulator∗ | 3.5 | 3 | 3.7.1 | 3.7.1.r0.g34c9113e | |
| snap-gene-prediction∗ | 2013-11-29 | 2 | 20131129 | ||
| ssm∗ | 1.4 | 6 | 1.43 1.4.0 | 1.32 1.1 1.0 | |
| staden-io-lib∗ | 1.14.13 | 5 | 1.14.142 | 1.14.13 1.14.11 1.14.9 1.14.82 1.14.6 1.13.7 1.13.5 1.12.42 | |
| sumaclust∗ | 1.0.31 | 4 | 1.0.36 | 1.0.35 1.0.34 1.0.31 1.0.202 1.0.10 | |
| tmalign∗ | 20190822 | 2 | 2016-05-25 | ||
| trf-tandem-repeats-finder∗ | 4.09 | 4 | 4.09.12 | 4.09 4.04 | |
| trinityrnaseq∗ | 2.11.0 | 4 | 2.14.0.FULL | 2.13.22 2.11.0 2.6.6 2.5.1 2.2.0 | |
| unicycler∗ | 0.4.7 | 3 | 0.5.0 | 0.4.8 0.4.7 | |
| vcflib∗ | 1.0.1 | 5 | 1.0.32 | 1.0.22 | v1.0.0.rc1.r127.gac59d4f |
| viennarna∗ | 2.4.17 | 7 | 2.5.04 | 2.4.182 2.4.172 | |
| wtdbg2∗ | 2.5 | 4 | 2.52 | 2.3 | |
| xssp∗ | 3.0.10 | 1 |
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