Projects

72 project(s) on this page

Project Selected Spr Newest Outdated Ignored
abacas 1.3.1 3 1.3.12
apbspdb2pqr 1.5 1
art 20160605 5 2.0.1 2.0 1.12.1 1.10.1 0.9.02
ascp 3.7.7 1
bbtools 38.87 2 38.96 1.9
bcalm 2.2.2 3 2.2.3 2.2.1 2.2.0.r49.g890ea4a
bioperl 1.007002 6 1.7.83 1.7.73 1.7.2 1.7.1 1.6.924 1.6.923 1.6.901 1.6.9 9999
bowtie 1.3.0 13 1.3.14 1.3.08 1.2.34 1.2.2 1.1.22 1.1.1 1.0.1 1.0.0 0.12.72
circos 0.69-9 7 0.69_9 0.69.9 0.69-9 0.69.6 0.69-6 0.69.4 0.69 0.66 0.64 0.552 0.49
clipper4coot 2.1.20180802 1
clustal-omega 1.2.4 11 1.2.410 1.2.1
clustalw 2.1 14 2.111 1.832 2.1+lgpl 2.1+lgpl
cutadapt 3.3 4 3.3 2.10 2.1 1.14
delly 0.8.5 5 1.0.32 0.9.12 0.8.72 0.8.3 0.8.2 0.8.1
dida 1.0.1 3 1.0.11 1.0.4 1.0.4.r5.gbcb26e5 4.2.1.0 4.2.0.0 4.1.5.0 4.1.4.0 4.1.3.6 4.1.3.0 4.1.2.6 4.1.2.0 4.1.1.0 4.0.5.2 3.9.1.0 3.7.8.8
discovardenovo 52488 2 52488
dssp 3.1.4 8 4.0.42 4.0.3 4.0.0 3.1.44 3.0.11 3.0.02 2.2.13
edirect 13.8 2 13.3.20200128
emboss 6.6.0 15 6.6.011 6.5.7 6.4.0 6.3.1 6.0.1
falco 0.2.4 2 0.31.0 0.29.1 0.30.0.r0.gbb811332
finch-rs 0.3.0 2 0.4.1
flash-seq 1.2.11 5 1.2.114
flye 2.8.3 1
gffcompare 0.12.1 4 0.12.6 0.12.2 0.10.15-1.be56ef4
gmap-gsnap 2019-09-12 3 2019.03.15 2021-03-08
groot 1.1.2 2 18.8
hh-suite 3.3.0 1
hssp 3.1.5 3 3.1.5 3.0.10
humann2 0.11.1 1
iqtree 1.6.12 5 2.1.2 2.0.7 2.0.6 1.6.122 1.6.9 1.6.1 1.5.3 1.3.11.1
iqtree2 2.0.7 2 2.1.3
kent-tools 401 1
kraken 1.1.1 7 2.1.1 1.1.13 1.12 1.0 0.10.5~beta 0.1 r70.2c5f7ce 32.368a837
kraken2 2.1.1 5 2.1.22 2.1.13 2.0.8~beta
libccp4 6.5.1 8 6.5.15 6.4.62 6.4.5 6.4.0_rc1 r1861
magic-blast 1.3.0 1
meme-motif-discovery 5.1.0 5 5.3.3 5.3.0 5.2.0 4.11.2_p2
minia 3.2.1 4 3.2.6 3.2.1+git20200522.4960a99 3.2.1 1.6906 1.6088 1.6067 3.2.1.r12.g5b131b9
minimap2 2.17 9 2.247 2.23 2.22 2.20 2.172 2.15 2.14 2.17.r46.gc9874e2
mmdb2 2.0.20 5 2.0.203 2.0.1 2.0.22
mmtf-cpp 1.0.0 14 1.0.013
mp-est 2.0 1
mrbayes 3.2.7 8 3.2.7a4 3.2.74 3.2.6 3.2.3 3.2.2 3.1.23
mummer 3.23 7 3.234 3.22 3.20 4.0.0.b2.2
nanofilt 2.7.1 2 2.6.0
ncbi-blast+ 2.2.31 2.2.26 15 2.13.04 2.12.04 2.11.06 2.10.1 2.9.02 2.8.12 2.7.1 2.6.02 2.2.313 2.2.30 2.2.292 2.2.28 2.2.27 2.2.262 2.2.25
ngmaster 0.5.6 1
paml 4.9j 10 4.10.1 4.9j6 4.9h2 4.9g 4.9e 4.8 4.7 4.4e 4.4c
phyml 3.3.20200621 8 3.3.202204082 3.3.202112312 3.3.202006214 3.3.20190909 3.3.20180621 3.3.20170530 3.2.0 2.4.5 r121.ab59039 201204122 20110919
plink 1.90b5 10 1.90.b6.17 1.076 1.90~b6.16-200217 1.90~b6.6-181012 1.90~b5.2-180109 1.90~b3.45-170113 1.90~b3.31-160203 1.90b3 1.9-beta6.10 v1.90b6.26 1.9.r40.gdcc7785a 1.90_pre140514 1.90~b6.24-211108 1.90~b6.21-201019
Project Selected Spr Newest Outdated Ignored
pymol 2.4.0 19 2.5.011 2.4.1 2.4.05 2.3.3 2.3.07 2.2.02 2.1.0 1.9.0.0.svn4184 1.8.6.0 1.8.6 1.8.4.02 1.7.7.1.svn4131 1.7.4.0 1.7.2.1 1.7.0.0 1.4.12 r4806.c7095ec2 20220504-8b553202 2.5.2 2.5.1
python:matplotlib 3.3.4 40 3.5.212 3.5.114 3.5.02 3.4.37 3.4.24 3.4.1 3.3.44 3.3.34 3.3.2 3.3.1 3.2.22 3.2.14 3.1.3 3.1.22 3.1.1 3.0.33 3.0.2 2.2.56 2.2.43 2.2.35 2.2.22 2.1.2 2.1.1 2.0.2 2.0.02 1.5.13 1.4.3 1.4.2 1.3.12 1.2.1 1.2.02 1.1.1~rc1+git20120423 0.99.1.22 r26679.b9b02f189
raptor 1.1.0 39 2.0.1539 2.0.14.1 2.0.14 2.0.13 2.0.92 2.0.8 2.0.6 2.0.3 2.0.2 2.0.0 1.4.2112 1.4.20 1.4.19 1.4.18 0~git20211220.754cdbf
rasusa 0.3.0 1
raxml 8.2.12 9 8.2.127 8.2.11 8.2.9 8.2.4 8.1.1 7.2.8 7.2.6
repeatmasker 4.0.7 4 4.1.2_p1 4.1.2-p1 4.0.1
rmblast 2.2.28 3 2.2.28 1.2
ruby:rails 1.5.1 21 7.0.33 7.0.2.44 7.0.2.34 7.0.2.2 7.0.1 6.1.62 6.1.5.12 6.1.5 6.1.4.7 6.1.4.6 6.1.4.4 6.1.4.14 6.1.4 6.1.3.22 6.1.3 6.1.2.1 6.0.52 6.0.4.82 6.0.4.7 6.0.4.4 6.0.4.12 6.0.3.7 6.0.3.5 6.0.3.4 6.0.3.3 6.0.2.2 5.2.82 5.2.7.12 5.2.7 5.2.62 5.2.4.4 5.2.4.3 5.2.4.1 5.2.34 5.2.2.1 5.2.2 5.2.12 5.1.72 5.1.6 5.1.5 5.1.42 5.0.7.2 5.0.2 4.2.11.3 4.2.11.1 4.2.10 4.2.7.1 4.2.62 4.2.5.1 4.2.4 4.1.8 4.1.1 4.0.2 3.2.19 3.2.18 3.2.16 3.2.13+1 3.0.5 2.3.14.1 2.3.14 2.3.5 1.5.1 1.1.6
sdsl-lite 2.1.1 7 3.0.0 2.1.14 2.0.3 v2.1.1.r132.gddb0fbbc
slim-simulator 3.5 3 3.7.1 3.7.1.r0.g34c9113e
snap-gene-prediction 2013-11-29 2 20131129
ssm 1.4 6 1.43 1.4.0 1.32 1.1 1.0
staden-io-lib 1.14.13 5 1.14.142 1.14.13 1.14.11 1.14.9 1.14.82 1.14.6 1.13.7 1.13.5 1.12.42
sumaclust 1.0.31 4 1.0.36 1.0.35 1.0.34 1.0.31 1.0.202 1.0.10
tmalign 20190822 2 2016-05-25
trf-tandem-repeats-finder 4.09 4 4.09.12 4.09 4.04
trinityrnaseq 2.11.0 4 2.14.0.FULL 2.13.22 2.11.0 2.6.6 2.5.1 2.2.0
unicycler 0.4.7 3 0.5.0 0.4.8 0.4.7
vcflib 1.0.1 5 1.0.32 1.0.22 v1.0.0.rc1.r127.gac59d4f
viennarna 2.4.17 7 2.5.04 2.4.182 2.4.172
wtdbg2 2.5 4 2.52 2.3
xssp 3.0.10 1

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