200 project(s) on this page
| Project | Selected | Spr | Newest | Outdated | Ignored |
|---|---|---|---|---|---|
| abacas | 1.3.1 | 4 | 1.3.13 | ||
| abpoa∗ | 1.5.4 | 6 | 1.5.45 | 1.5.32 1.5.2 1.5.1 1.4.1 | HEAD |
| abyss | 2.3.10 | 9 | 2.3.106 | 2.3.7 2.3.5 2.3.4 2.3.1 2.2.5 2.2.4 2.1.52 2.0.2 1.9.0 1.3.6 0.3 | HEAD |
| ad2vcf | 0.1.6 | 3 | 0.1.6.20 | 0.1.6.19 0.1.6 | |
| adapterremoval | 2.3.4 | 5 | 2.3.44 | 2.3.32 2.3.2 2.3.1 2.2.3 2.2.2 | |
| aevol∗ | 9.1 | 2 | 9.1 | 5.0 4.4 4.2 | |
| afni∗ | 25.1.05 | 3 | 25.1.15 | 25.0.08 24.1.16 24.1.15 24.0.08 | |
| alevin-fry∗ | 0.11.2 | 2 | 0.11.22 | ||
| aliview | 1.30 | 2 | 1.30 | 1.28 1.27 | |
| allelecount | 4.3.0 | 2 | 4.3.02 | 4.2.1 | |
| andi | 0.14 | 7 | 0.145 | 0.132 0.12 0.9.6.1 | 0.14.3 |
| any2fasta | 0.4.2 | 4 | 0.4.24 | ||
| argparse-p-ranav∗ | 3.2 | 12 | 3.210 | 3.14 3.05 2.93 2.6 2.5 2.4 2.3 2.2 2.1 | HEAD |
| armadillo | 14.4.3 | 28 | 14.4.38 | 14.4.2 14.4.14 14.2.32 14.2.22 14.2.12 14.0.3 14.0.22 14.0.1 12.8.3 12.8.22 12.8.1 12.6.72 12.6.64 12.6.4 12.6.3 12.6.22 12.4.2 12.4.0 12.2.03 11.4.32 11.4.23 11.0.1 10.8.24 10.7.5 10.7.4 10.7.32 10.7.1 10.7.0 10.2.0 10.1.2 9.900.6 9.900.4 9.800.4 9.600.6 9.600.5 9.200.7.1 9.200.7 8.400.0 8.100.0 6.700.7 6.500.5 4.550.2 4.200.0 | |
| artemis-genome-viewer | 18.2.0 | 4 | 18.2.02 | 18.1.0 17.0.1.11 17.0.12 16.0.17 16.0.0 | |
| astral-species-tree | 5.7.1 | 4 | 5.7.13 | ||
| augustus-gene-prediction | 3.5.0 | 6 | 3.5.05 | 3.4.02 3.3.3 3.3.2 3.3 2.5.5 | HEAD |
| avida | 2.14.0 | 4 | 2.14.0 | 2.12.42 0_git20190813 | |
| avogadro2∗ | 1.100.0 | 17 | 1.100.014 | 1.99.06 1.98.12 1.97.05 1.95.12 1.93.03 1.91.0 1.90.0 | 1.93.0.r453.87101bc |
| bali-phy | 3.6.1 | 4 | 4.0 | 4.0~beta16 4.0-beta10 4.0~beta2 3.6.12 3.6.02 3.4.1 3.4 | |
| bamm-bayesian∗ | 2.5.0 | 3 | 2.5.03 | ||
| bamtools | 2.5.3 | 10 | 2.5.36 | 2.5.26 2.5.1 2.4.1 2.4.0 | 9999 2.5.2.r4.g2bd8699 HEAD |
| bayestraits | 4.1.3 | 2 | 4.1.3 | 3.0.5 | |
| bbmap∗ | 39.28 | 6 | 39.28 | 39.20 39.15 39.08 39.06 39.013 38.95 38.90 38.87 38.79 38.63 | |
| bcftools∗ | 1.22 | 16 | 1.227 | 1.218 1.204 1.192 1.18 1.17 1.163 1.15.1 1.132 1.12 1.11 1.10.2 1.10 1.92 1.7 1.2 | 1.17.r18.g60c65eb9 |
| beagle-sequence-likelihood | 4.0.1 | 4 | 4.0.13 | 3.1.22 2.1.2+20171110 | |
| beast∗ | 1.10.4 | 5 | 1.10.42 | 0.7.8 0.7.1 0.6.4 | r9324.d92270e76 HEAD |
| beast2 | 2.7.7 | 5 | 2.7.72 | 2.7.6 2.7.4 2.7.3 2.6.6 2.6.32 2.6.0 2.5.1 2.4.7 2.4.4 | |
| bedops | 2.4.42 | 7 | 2.4.423 | 2.4.414 2.4.40 2.4.392 2.4.37 2.4.35 2.4.262 | |
| bedtools | 2.31.1 | 15 | 2.31.112 | 2.31.03 2.30.02 2.27.1 2.26.02 2.25.0 2.18.0 2.17.0 2.15.0 | |
| bioawk | 2017.09.11 | 8 | 1.06 | 2017-09-11 1.0.7 | |
| biobambam2 | 2.0.185_release_20221211202123 | 6 | 2.0.1852 | 2.0.185_release_20221211202123 2.0.183 2.0.182 2.0.179 2.0.177 2.0.146 2.0.95 | 9999 |
| biolibc | 0.2.7 | 3 | 0.2.72 | 0.2.6.4 | |
| blake3∗ | 1.8.2 | 33 | 1.8.220 | 1.8.15 1.7.04 1.6.1 1.5.53 1.5.43 1.5.32 1.5.16 1.5.05 1.4.1 1.4.0 1.3.33 1.3.15 1.2.02 0.3.8 | git |
| bowtie∗ | 1.3.1 | 12 | 1.3.111 | 1.3.04 1.2.32 1.2.2 1.1.2 1.0.0 0.12.7 | |
| bowtie2∗ | 2.5.4 | 13 | 2.5.48 | 2.5.3 2.5.23 2.5.15 2.5.0 2.4.5 2.4.43 2.4.2 2.4.1 2.3.5.1 2.3.4.32 2.3.4.1 2.2.6 2.1.02 | 2.5.4.r4.gb7e97e9 |
| bracken | 3.1 | 3 | 3.1 | 2.9 2.6.0 | |
| bsdmainutils | 12.1.7 | 3 | 12.1.82 | 12.1.7+nmu3ubuntu2 12.1.7+apertis0 12.1.7 11.1.2.4 11.1.2 11.1.2ubuntu3 11.1.2ubuntu1 9.0.12+nmu1 9.0.6ubuntu3 9.0.5ubuntu1 | 12.1.8+apertis0 |
| btllib | 1.7.5 | 5 | 1.7.54 | 1.7.3 1.4.10 | |
| bucky | 1.4.4 | 2 | 1.4.42 | ||
| bustools | 0.45.1 | 5 | 0.45.12 | 0.45.02 0.44.1 0.43.22 0.42.0 0.41.0 0.40.0 | |
| bwa | 0.7.19.r0.gb92993c | 14 | 0.7.194 | 0.7.184 0.7.179 0.7.12 0.7.5a 0.5.9 | v0.7.17.r23.gfbfffc9 HEAD 2022-09-23 |
| calamares | 3.2.62 | 15 | 3.3.1410 | 3.3.14.r12336.0fd501fad 3.3.132 3.3.122 3.3.10 3.3.9+p22.04+vstable+git20241108.0248 3.3.9+p22.04+vunstable+git20240924.0026 3.3.84 3.3.6 3.3.53 3.3.3 3.3.0.23.0321 3.2.625 3.2.614 3.2.60 3.2.59 3.2.56 3.2.55 3.2.47 3.2.45 3.2.44.3 3.2.41.12 3.2.39.32 3.2.39.2 3.2.362 3.2.26.1 3.2.20 3.2.11 3.2.4.1+rb2▲ 3.2.4▲ 3.1.12▲ | 3.3.13.r1.gbabaddf |
| canu | 2.3 | 6 | 2.3 | 2.24 2.0 1.92 1.8 1.6 | 2.2.r162.gc61ebbb7a |
| catsequences | 1.5 | 2 | 1.5 | ||
| cctz | 2.5 | 12 | 2.53 | 2.410 2.35 2.2 | |
| cd-hit∗ | 4.8.1 | 11 | 4.8.110 | 4.6.8 4.6.6 4.6.4 4.6.1-2012-08-27 | |
| cdbfasta | 2023.07.10 | 5 | r4.014498c 2023.07.10 2017-03-16 1.00+git20230710.da8f5ba 1.00+git20181005.014498c 0.99-20100722 0.1 | ||
| centrifuge | 1.0.4.2 | 6 | 1.0.4.23 | 1.0.4.1 1.0.4 1.0.32 1.0.3~beta | |
| cimfomfa∗ | 22.273 | 4 | 22.2732 | 21-3612 | |
| Project | Selected | Spr | Newest | Outdated | Ignored |
| ckbcomp∗ | 1.237 | 6 | 1.2372 | 1.236 1.234 1.2312 1.230 1.227 1.2263 1.2232 1.221 1.220 1.2192 1.2102 1.2072 1.205 1.196 | |
| clann | 194f8aa | 2 | 4.2.5 | 194f8aa | |
| clustal-omega∗ | 1.2.4 | 12 | 1.2.411 | 1.2.2 1.2.1 | |
| clustalw∗ | 2.1 | 15 | 2.113 | 1.832 | 2.1+lgpl 2.1+lgpl |
| clustalx∗ | 2.1 | 8 | 2.17 | 2.1+lgpl 2.1+lgpl | |
| codonw | 1.4.4 | 3 | 1.4.43 | ||
| coin-or-symphony | 5.7.2 | 5 | 5.7.24 | 5.7.1 5.6.173 5.6.16 5.6.1 5.5.6 | |
| consel | 2011.05.12 | 3 | 0.20 | 0.1 | 2011.05.12 |
| cramino | 1.1.0 | 2 | 1.1.0 | 0.9.0 | |
| cufflinks | 2.2.2.20190706.162801 | 6 | 2.2.2.20190706.162801 | 2.2.1.89 2.2.15 2.1.1 | 2.2.1.r89.gdc3b0cb |
| cutadapt∗ | 5.1 | 5 | 5.1 | 4.9 4.0 3.3 1.14 | |
| cytoscape | 3.10.3 | 6 | 3.10.35 | 3.10.2 3.10.1 3.10.0 3.9.1 3.6.1 | |
| diamond-aligner∗ | 2.1.11 | 9 | 2.1.122 | 2.1.114 2.1.102 2.1.92 2.1.8 2.1.62 2.1.3 2.0.15 2.0.14 2.0.7 2.0.6 0.9.36 0.9.30 0.9.24 0.9.17 | 0.9.27.r1.g58ee82e |
| dnarates | 1.1.0 | 2 | 1.1.02 | ||
| edirect∗ | 24.2.20250622 | 3 | 13.8 | 13.3.20200128 | |
| edlib∗ | 1.2.7 | 6 | 1.2.75 | 1.2.6 | 2021-08-20 |
| emboss∗ | 6.6.0 | 15 | 6.6.013 | 6.5.7 6.4.0 6.0.1 | |
| estscan | 3.0.3 | 2 | 3.0.32 | ||
| exabayes | 1.5.1 | 3 | 1.5.12 | 1.5 | |
| examl | 3.0.22 | 3 | 3.0.223 | 3.0.21 3.0.20 | |
| exonerate | 2.4.0 | 11 | 2.4.010 | 2.2.02 | |
| fasda | 0.2.0 | 3 | 0.2.0.1 | 0.2.0 0.1.5.8 | |
| fasta | 36.3.8i.2023.09t | 7 | 36.3.8i2 | 36.3.8h_2020-05-04 36.3.8h.2020-02-11 36.3.8h3 36.3.8g2 36.3.8d 36.3.8 21.1.1 | 36.3.8i.14-Nov-2020 |
| fastahack∗ | 1.0.0 | 5 | 1.0.05 | ||
| fastani | 1.34 | 6 | 1.344 | 1.33 1.32 | |
| fastdnaml | 1.2.2 | 6 | 1.2.25 | 1.2.2_p10 | |
| fastme | 2.1.6.3 | 4 | 2.1.6.33 | 2.1.5.1 | |
| fastp | 1.0.1 | 10 | 1.0.1 | 1.0.0 0.26.0 0.24.12 0.24.03 0.23.44 0.23.3 0.23.23 0.22.0 0.20.12 0.20.0 0.19.6 | |
| fastq-trim | 0.1.4 | 3 | 0.1.42 | 0.1.3 | |
| fastqc | 0.12.1 | 10 | 0.12.17 | 0.11.94 0.11.8 0.11.5 0.11.4 0.10.1 | |
| fasttree | 2.1.9 | 9 | 2.1.118 | 2.1.102 2.1.8 2.1.7 | |
| fastuniq | 1.1 | 2 | 1.12 | ||
| fastx-toolkit∗ | 0.0.14 | 10 | 0.0.14.6 | 0.0.148 0.0.13 | |
| fermi-lite | 0.1.r13.g85f159e | 4 | 0.12 | 0.1.r13.g85f159e | 0.1.13 0.1+git20221215.85f159e 0.1+git20190320.b499514 |
| figtree | 1.4.4 | 7 | 1.4.46 | 1.4.3 1.4.2 1.4 | 1.4.4.14 |
| fiji | 20250514.1117 | 5 | 20250514-11172 | 20250408-1717 20250302.2217 20240614-2117 20230801_1717 20201104-1356 | |
| flair∗ | 2.2.0 | 2 | 2.2.0 | 1.6.4 | |
| freebayes | 1.3.9 | 8 | 1.3.10 | 1.3.94 1.3.7 1.3.62 1.3.52 1.3.22 1.3.1 1.2.0 1.1.0 | HEAD |
| fsplit | 2016.08.23 | 2 | 5.5 | ||
| garli | 2.1 | 3 | 2.12 2.01 | ||
| garlic | 1.6 | 9 | 1.68 | 1.5 | |
| gatb-core | 1.4.2 | 3 | 1.4.22 | 1.4.1+git20191209.9398f28 1.4.1+git20181225.44d5a44 | |
| gatk | 4.6.2.0 | 6 | 4.6.2.02 | 4.6.1.03 4.5.0.02 4.4.0.0 4.3.0.0 4.2.0.0 3.8-1 | |
| gblocks | 0.91b | 4 | 0.91b4 | ||
| gconf∗ | 2013.01.22 | 34 | 3.2.629 | 3.2.5 3.2.3 2.32.4 2.31.7 2.28.0 2.22.0 1.0.9 | |
| gde∗ | 2.2.1 | 2 | 0.09 | ||
| generand | 0.1.2 | 4 | 0.1.2.9 | 0.1.23 | |
| generax | 2.1.3 | 2 | 2.1.3 | 2.0.4 | master |
| getorganelle | 1.7.7.1 | 2 | 1.7.7.1 | 1.7.7.0 | |
| gffcompare∗ | 0.12.6 | 5 | 0.12.62 | 0.12.2 0.12.1 0.10.15-1.be56ef4 | |
| Project | Selected | Spr | Newest | Outdated | Ignored |
| gffread∗ | 0.12.7 | 8 | 0.12.77 | 0.12.1 0.11.7 0.9.12-1.ba7535f | |
| glimmerhmm | 3.0.4 | 2 | 3.0.4 | 3.0.1 | |
| google-crc32c∗ | 1.1.2 | 4 | 1.1.24 | 1.1.2 | |
| graphite-gtk-theme∗ | 2024.07.25 | 2 | 2024.07.15 2024-07-15 2024-04-28 2023-05-17 2022-09-02 | 2024.07.15.r18.g52d8e00 | |
| graphite-kde-theme∗ | 2024.10.27 | 2 | 2023-10-25 2022-02-08 | ||
| gri | 2.12.27 | 10 | 2.12.273 | 2.12.26 2.12.237 2.12.7 | 2.12.23.r20.gd9969d1 |
| groot | 1.0.2 | 2 | 1.1.2 | 1.0.0.r85.gca6c8f2 | |
| gw | 1.2.3 | 3 | 1.2.33 | ||
| hisat2 | 2.2.1 | 9 | 2.2.19 | 2.1.0 | 2.2.1.r55.g5086938 |
| hmmer | 3.4 | 17 | 3.411 | 3.3.25 3.3 3.2.1 3.1beta2 3.1b2 3.1_beta2 3.1b1 3.02 3 2.4i2 2.3.23 | |
| hopscotch-map∗ | 2.3.1 | 3 | 2.3.13 | 2.3.0 2.2.1 | |
| htslib∗ | 1.22 | 20 | 1.229 | 1.2110 1.202 1.19.13 1.194 1.18 1.172 1.162 1.15.1 1.14 1.132 1.12 1.112 1.10.2 1.10 1.93 1.7 1.2.1▲ 0.2.0~rc3▲ | 1.17.r16.g93434e04 |
| hybpiper | 2.3.2 | 2 | 2.3.2 | 2.1.8 | |
| idba | 1.1.3 | 5 | 1.1.35 | 1.1.2 | 9999 |
| igv∗ | 2.19.4 | 8 | 2.19.42 | 2.18.5 2.17.4 2.17.3 2.16.23 2.16.03 2.15.1 2.12.0 2.9.2 2.6.3 2.4.17 2.4.6 2.3.68 2.3.14 | |
| infernal | 1.1.5 | 8 | 1.1.55 | 1.1.42 1.1.32 1.1.2 1.1.1 1.1~rc4 1.0.22 | |
| iqtree∗ | 3.0.1 | 7 | 3.0.1 | 2.4.0 2.3.6 2.3.4 2.2.2.72 2.2.2.4 2.2.0.4 2.0.7 1.6.123 1.6.9 1.6.1 1.3.11.1 | |
| iwidgets∗ | 4.1.1 | 13 | 4.1.110 | 4.12 4.1.0 4.0.22 4.0.12 | |
| jags∗ | 4.3.2 | 12 | 4.3.29 | 4.3.14 4.3.02 4.1.0 3.4.0 | |
| jasp-desktop∗ | 0.19.3 | 2 | 0.19.32 | 0.19.1 0.18.3 | |
| javafx-scenebuilder∗ | 24.0.0 | 2 | 24.0.0 | 21.0.0 | |
| jellyfish-k-mer | 2.3.1 | 8 | 2.3.14 | 2.3.05 2.2.10 2.2.8 2.2.4 1.1.122 1.1.11 1.1.10 | |
| jmodeltest | 2.1.10r20160303 | 2 | 2.1.10 | 2.1.10r20160303 | |
| junest | 7.4.10 | 2 | 7.4.10 | 7.4.2.r2.ba0ddcc | |
| kaks-calculator | 3.0 | 3 | 3.0 | 2.02 1.2 | |
| kallisto | 0.51.1 | 10 | 0.51.15 | 0.50.13 0.50.0 0.48.03 0.46.22 0.46.1 | |
| kma | 1.5.1 | 4 | 1.5.1 | 1.5.0 1.4.21 1.4.15 1.4.14 1.4.11 1.3.28 1.3.23 1.3.10 1.3.6 1.2.21 | |
| kraken2 | 2.14 | 6 | 2.14 | 2.1.52 2.1.3 2.1.23 2.1.12 2.0.8~beta | HEAD |
| last | 1642 | 6 | 1642 | 16393 1609 1592 1543 1542 14992 1453 1447 1411 1260 1179 1133 1060 963 921 712 393 | |
| lastz | 1.04.52 | 6 | 1.04.52 | 1.04.41 1.04.222 1.04.15 1.04.033 | HEAD |
| libdivsufsort | 2.0.1 | 14 | 2.0.2.1 | 2.0.112 | HEAD 2.0.2.1.20151027 |
| libgtextutils∗ | 0.7 | 11 | 0.7.2 | 0.78 0.6.1 0.62 | |
| libmaus2 | 2.0.813_release_20221210220409 | 6 | 2.0.8132 | 2.0.813_release_20221210220409 2.0.810 2.0.786 2.0.768 2.0.767 2.0.689 2.0.611 | 9999 |
| libnode∗ | 24.2.0 | 2 | 23.11.1 22.14.0 | ||
| libsbml∗ | 5.20.4 | 10 | 5.20.52 | 5.20.46 5.20.23 5.19.7 5.19.03 5.18.02 5.17.2 5.16.0 5.12.0 | |
| libxpm∗ | 3.5.13▲ | 46 | 3.5.1741 | 3.5.16▲2 3.5.15▲5 3.5.13▲11 3.5.12-1+apricot▲ 3.5.12▲11 3.5.11▲5 3.5.10▲4 3.5.9▲2 3.5.8▲ 3.5.7▲ | 3.5.15.r12.g8b9c4e4 |
| libxtend | 0.2.1 | 3 | 0.2.12 | 0.2.0.2 | |
| libxview∗ | 3.2p1.4_25.22 | 2 | 3.2p1.4 | ||
| lua:luajson∗ | 1.3.4 | 6 | 1.3.45 | 1.3.32 1.3.2 1.3.1 1.3 1.2.2 1.2.1 1.2 1.1.2 1.1 1.0.3 1.0.1 1.0 0.10 | |
| macse | 2.07 | 2 | 2.07 | 2.03 | |
| maddy-mail-server | 0.8.1 | 6 | 0.8.14 | 0.7.13 0.7.0 0.6.3 | v0.1.1.r0.g8f1d572 |
| mafft∗ | 7.526 | 11 | 7.5264 | 7.5252 7.5202 7.508 7.505 7.4902 7.4752 7.453 7.407 7.310 7.271 7.267 7.123 | |
| mash-genome-distance | 2.3 | 5 | 2.33 | 2.2.22 2.12 2.0 | |
| mashmap | 3.1.3 | 3 | 3.1.33 | ||
| mcl∗ | 22.282 | 9 | 22-282 | 14-1374 14_1372 14.1372 12-135 1.008.09.149 | |
| mega∗ | 11.0.13 | 2 | 11.0.132 | ||
| megahit | 1.2.9 | 9 | 1.2.9.20 | 1.2.97 1.1.4 | |
| mesquite | 3.81_build955 | 3 | 3.81_build955 | 2.99 2.3.0 | |
| mhap | 2.1.3 | 3 | 2.1.33 | 2.1.1 1.6 | |
| mimi | 0.0.2 | 2 | 0.1.0 | d85ea825 | r117.ca08c8d |
| Project | Selected | Spr | Newest | Outdated | Ignored |
| miniasm | 0.3 | 7 | 0.36 | 0.2 | 2018-3-30 |
| minimap2∗ | 2.30 | 9 | 2.304 | 2.29 2.285 2.27 2.262 2.243 2.172 2.15 | 2.24.r39.g5e72423 |
| mitos | 2.1.9 | 2 | 2.1.9 | 0.9.2 | |
| mmseqs2 | 17.b804f | 7 | 17-b804f2 17.b804f | 17.b804.f 15-6f4523 14-7e2842 13-45111 13.0 12-113e3 9-d36de | HEAD |
| modeltest-ng∗ | 0.1.7 | 2 | 0.1.7 | 20220721 | |
| mosdepth | 0.3.4 | 4 | 0.3.112 | 0.3.10 0.3.9 0.3.8 0.3.6 0.3.5 0.3.32 0.3.12 | |
| mothur | 1.48.3 | 6 | 1.48.3 | 1.48.2 1.48.1 1.48.03 1.47.0 1.44.32 1.42.1 1.39.5 1.36.1 1.31.2 1.27.0 1.41.21 | |
| mpboot | 1.2 | 2 | 1.2 | 1.1.0 | |
| mpich∗ | 4.3.0 | 21 | 4.3.12 | 4.3.0+really4.2.1 4.3.07 4.2.3 4.2.2 4.2.12 4.2.0 4.1.25 4.1.12 4.0.33 4.0.24 4.0.1 4.0 3.4.32 3.4.2 3.4.13 3.3.23 3.3 3.3~a2 3.2.1 3.22 3.1.4 3.1 3.0.43 1.5 1.4.1 1.4.1p12 1.2.7p1 1.2.12 | HEAD develop |
| mptp | 0.2.5 | 2 | 0.2.52 | 0.2.4 0.2.2 | |
| mrbayes∗ | 3.2.7 | 9 | 3.2.7a4 | 3.2.75 3.2.6 3.2.2 3.1.2 | HEAD |
| mrmodeltest∗ | 2.4 | 2 | 2.4 | 2.1 | |
| mummer∗ | 4.0.1 | 8 | 4.0.13 | 4.0.0rc1 3.234 3.20 | |
| muscle-sequence-alignment∗ | 5.3 | 12 | 5.32 | 5.1.03 3.8.15516 3.8.315 | |
| muscle3∗ | 3.8.1551 | 2 | 3.8.1551 | ||
| nanopolish | 0.14.0 | 5 | 0.14.03 | 0.13.3 0.13.2 0.12.0 0.11.3 0.11.0 0.9.0 0.4.0 | 9999 0.14.0.r10.g21c75db |
| nanostat∗ | 1.6.0 | 2 | 1.6.0 | 1.4.0 | |
| ncbi-blast+∗ | 2.16.0 | 12 | 2.16.06 | 2.14.12 2.14.0 2.13.03 2.12.0 2.11.0 2.9.0 2.8.1 2.6.0 2.2.312 2.2.29 2.2.28 2.2.262 | |
| ncbi-cxx-toolkit | 25.2.0 | 2 | 29.0.1 | ||
| ncbi-genome-download | 0.3.3 | 3 | 0.3.3 | 0.3.2 0.3.1 | |
| ncl∗ | 2.1.21 | 6 | 6.6.25 | 6.6.2.dfsg.1 6.5.0 6.4.0 6.3.02 6.1.2 6.0.0 2.1.18 | |
| ncurses∗ | 6.5 | 57 | 6.5_20250614 6.5.20250614 6.536 | 6_5_20250531 6.5.20250510 6.5+20250216 6.5.20250111 6.5.20241228 6.5.202408312 6.5+20240427 6.5_p20250614 6.5_p20250531 6.5_p20250503 6.5_p20241006 6.4+20240113 6.4_20230520 6.4.20221231 6.4_p20240414▲ 6.4_p20240330▲ 6.4_p20230401▲ 6.414 6.4_p20240420▲ 6.4_p20231125▲ 6.4_p20230506▲ 6.3.20220618▲ 6.3-20220402▲ 6.3▲11 6.3_p20221119▲ 6.3_p20220521▲ 6.3-p20220507▲ 6.3_p20211120▲ 6.2.20210619▲ 6.2+20201114▲ 6.2▲10 6.1+20181013.1▲ 6.1+20181013▲ 6.1.20180407▲ 6.1.2▲ 6.1▲5 6.0+20160213▲ 6.0▲3 5.9.20150117▲ 5.9.20141206▲ 5.9+20140118▲ 5.9▲4 5.8▲ 5.7▲3 5.6▲ | 6.5.20240601.r0.ga09f7429 6.4.20231209.r0.gb5a2b7c7 6.5.20250621 6.5_p20250531 6.5_p20250329 6.5_p20250308 6.5_p20250125 6.5_p20241109 |
| node:d3∗ | 7.9.0 | 4 | 7.9.0 | 5.16.0 5.16.0+~cs5.28.10 5.12.0 3.4.8 | |
| nwg-launchers | 0.7.1.1 | 13 | 0.7.1.111 | 0.7.12 0.6.34 0.6.2 0.5.0 | 9999 r199.eaad654 |
| open-delta | 1.03_java8 | 2 | 1.03_java8 | 1.02 | |
| openjdk∗ | 23.0.2.u7 22.0.2.u9 | 41 | 25~25ea 25~22ea 25~16ea 25_p19 25_p19_beta 25.0.0.0.26 25 24+36 24~16ea 24.0.1+9.1 24.0.1+92 24.0.1.9 24.0.1+9~us1 24.0.13 24.0.1.0 24.0.1.u9 24.0.1_p9 24.0.1+ga 24.0.0.12 24.0.0.1 24.0.02 242 23+37 23.0.2+7.1 23.0.2+72 23.0.2.1 23.0.23 23.0.2.u7 23.0.2_p72 23.0.2+ga 23.0.1+11 23.0.1 23.0.1.u0 23.0.0.37 22+36 22.0.2+9.1 22.0.2.9 22.0.2+9 22.0.2.1 22.0.24 22.0.2.u9 22.0.2_p9 22.0.2+ga 22.0.0.21 21+35 21.0.8+7 21.0.8~5ea 21.0.7~8ea 21.0.7+6.1 21.0.7+62 21.0.7.6 21.0.7+6~us1 21.0.7+2 21.0.7.1 21.0.7.0.64 21.0.75 21.0.7.0 21.0.7.u6 21.0.7_p64 21.0.7+ga 21.0.6.72 21.0.6+7 21.0.6.0.73 21.0.62 21.0.6.0 21.0.6.u7 21.0.6_p72 21.0.5.112 21.0.5~8ea 21.0.5.4 21.0.5.0.112 21.0.5.0.10 21.0.5.0 21.0.5 21.0.4.72 21.0.4+7 21.0.4.0.72 21.0.4.0 21.0.3.92 21.0.3+92 21.0.3_9 21.0.3.0.92 21.0.3.0 21.0.3 21.0.2.13 21.0.2.12 21.0.2.0.132 21.0.22 21.0.1.12▲ 21.0.1.0.12▲ 21.0.1▲2 21.0.0.35▲2 21.0.0.0.35▲ 21▲ 20+36 20.0.2+9.1 20.0.2.9 20.0.2+9 20.0.2.1 20.0.2.0.9 20.0.23 20.0.2_p9 19.0.2+7.1 19.0.2+72 19.0.2.7 19.0.2.1 19.0.23 19.0.2.u7 19.0.2_p7 19.0.0.7 19.0.0.3 19 19-ga 18~36ea 18+36 18.0.2+9.1 18.0.2+9 18.0.2.1.1 18.0.2.14 18.0.2.0.9 18.0.2 18.0.2.u1 18.0.2_p9 18.0.1.33 18.0.0.27 17.0.16~5ea 17.0.15+6.1 17.0.15+62 17.0.15.6 17.0.15+6~us1 17.0.15~5ea 17.0.15+2 17.0.15.0.64 17.0.156 17.0.15.0 17.0.15.u6 17.0.15_p64 17.0.15+ga 17.0.14.73 17.0.14+7 17.0.14.0.73 17.0.14.0 17.0.14 17.0.14.u7 17.0.14_p72 17.0.13.112 17.0.13.0.113 17.0.13.0 17.0.13 17.0.12.72 17.0.12+7 17.0.12.0.73 17.0.12.0 17.0.12_p7 17.0.11.92 17.0.11+9 17.0.11.0.93 17.0.11.0 17.0.11.u9 17.0.11_p9 17.0.10.7 17.0.10.0.73 17.0.10.0 17.0.10 17.0.10_p7▲ 17.0.9.9▲ 17.0.9.8▲2 17.0.9.0.9▲ 17.0.9.0▲ 17.0.8.101▲ 17.0.8.7▲2 17.0.8.1▲ 17.0.8.0.7▲3 17.0.8.0▲ 17.0.8_p7▲ 17.0.7.7▲2 17.0.7+7▲ 17.0.7+7~us1▲ 17.0.7.3▲ 17.0.7.0.7▲2 17.0.7.0▲ 17.0.6.10▲ 17.0.6.9▲ 17.0.6.0.10▲2 17.0.6.0.9▲ 17.0.6.0▲ 17.0.5.8▲2 17.0.5+8▲ 17.0.5.0.8▲ 17.0.5.0▲ 17.0.5▲ 17.0.4.101▲ 17.0.4.8▲ 17.0.4.1.1▲2 17.0.4.0.8▲ 17.0.4.0▲ 17.0.3.7▲ 17.0.3.0.7▲ 17.0.3.0.6▲ 17.0.3.0.5▲ 17.0.3.0▲ 17.0.2.20220913▲ 17.0.2.8▲2 17.0.2+8▲ 17.0.2.0.8▲ 17.0.1.12.1▲ 17.0.1.12▲2 17.0.1.0.12▲ 17.0.1.u12▲ 17.0.0.35▲ 17.0.0.20▲ 17.0.0.0.35▲ 17.0.0.0.33▲ 17.0.0.0.26▲ 16.0.2.72 16.0.23 16.0.2.u7 16.0.2_p7 16.0.1.9 16.0.1+9 16.0.1▲ 16.0.0.36 15.0.102 15.0.10.u5 15.0.9 15.0.8_p4 15.0.7_p4▲ 15.0.5▲ 15.0.2.7▲ 15.0.1.9▲2 15.0.0.36▲ 14.0.2.122 14.0.24 14.0.2.u12 14.0.2_p12 14.0.1.7 13.0.102 13.0.142 13.0.14.u5 13.0.13 13.0.12_p4 13.0.9_p3▲ 13.0.7+5▲ 13.0.3▲ 13.0.2.8▲ 13.0.2▲ 12.33 12.0.2.10 12.0.2+9 12.0.2.1 12.0.22 12.0.2.u10 12.0.2_p10 12.0.2.ga 11.0.28~3ea 11.0.27+6.1 11.0.27.6 11.0.27+6 11.0.27+6~us1 11.0.27.5 11.0.27.0.63 11.0.274 11.0.27.0 11.0.27.u6 11.0.27_p63 11.0.27+ga 11.0.26.42 11.0.26+42 11.0.26.0.42 11.0.262 11.0.26.0 11.0.26_p42 11.0.25.92 11.0.25~5ea 11.0.25+5 11.0.25.0.93 11.0.25.0 11.0.25 11.0.25.u9 11.0.24.82 11.0.24+8 11.0.24.0.83 11.0.24.0 11.0.24_p8▲ 11.0.23+9▲3 11.0.23.9▲2 11.0.23.0.9▲3 11.0.23.0▲ 11.0.23_p9▲ 11.0.22.7▲ 11.0.22+7▲ 11.0.22.0.7▲3 11.0.22.0▲ 11.0.22▲ 11.0.22_p7▲ 11.0.21.9▲2 11.0.21.0.9▲2 11.0.21.0▲ 11.0.20.101▲ 11.0.20.8▲2 11.0.20.1.1▲ 11.0.20.1▲ 11.0.20.0.8▲3 11.0.20.0▲ 11.0.19.7▲2 11.0.19+7▲ 11.0.19+7~us1▲ 11.0.19.0.7▲2 11.0.19.0▲ 11.0.19_p7▲ 11.0.18.10▲2 11.0.18.0.10▲3 11.0.18.0.9▲ 11.0.18.0▲ 11.0.17.8▲2 11.0.17+8▲2 11.0.17.0.8▲2 11.0.17.0.7▲ 11.0.17.0.1▲ 11.0.17.0▲ 11.0.17▲ 11.0.17.u1▲ 11.0.16.20220913▲ 11.0.16.101▲ 11.0.16.8▲ 11.0.16+8▲ 11.0.16.1.1▲ 11.0.16.0.8▲ 11.0.16.0▲ 11.0.15.10▲ 11.0.15.0.10▲2 11.0.15.0.9▲ 11.0.15.0.8▲ 11.0.15.0▲ 11.0.14.101▲ 11.0.14.1.1▲ 11.0.14.1+1▲ 11.0.14.0.9▲ 11.0.13.9▲ 11.0.13.8▲ 11.0.13.0.8▲2 11.0.13.0.7▲ 11.0.12.7▲2 11.0.12.0.7▲ 11.0.12.0.1▲ 11.0.11.9▲ 11.0.11.0.9▲2 11.0.11.0.1▲ 11.0.10.9▲ 11.0.10.0.9▲ 11.0.10.0.1▲ 11.0.9.11▲3 11.0.9.2+1▲ 11.0.8.10▲2 11.0.7.10▲2 11.0.7+10▲ 11.0.7_p10▲ 11.0.6.10▲ 11.0.5.10.1▲ 11.0.5.10▲ 11.0.4.11▲ 11.0.4+11▲ 11.0.3.7▲ 11.0.2.7▲ 11.0.1.13▲ 11.0.ea.28 10.46 10.0.2.134 10.0.2+13 10.0.2.0 10.0.2_p13 10.0.1.10 10.0.1+10 9.181 9.0.4.122 9.0.4+12 9.0.4.112 9.0.4.0 9.0.4_p12 9.0.1.11 9~b114 8u_452.3.35.0 8.452.09.1 8.452.09 8.452_p09 8.452.u09 8.442.6 8.442_p06 8.432.06 8.402.06 8.392.08 8.342.07.20220913 8.332.09.1 8.312.07 8.181.13 8.0.292.10 8.0.282.8 8.0.265.01 8.0.252.09 8u999▲ 8u452-ga▲ 8u452+ga▲ 8u452-ga~us1▲ 8u442▲ 8u442-ga▲ 8u442-b06▲ 8u442-b06~us1▲ 8u422-b05▲ 8u412-ga▲ 8u402-ga▲ 8u372▲ 8u372-ga~us1▲ 8u362-ga▲ 8u352-ga▲ 8u332b05▲ 8u312-b07▲ 8u292-b10▲2 8u252-b09▲ 8u222-b10▲ 8u212-b01▲ 8u162-b12▲ 8u91_b14▲ 8u77-b03▲ 7.321.2.6.28▲ 7.311.2.6.27▲ 7u321▲ 7.u261_2.6.22▲ 7u211-2.6.17▲ 7.u171_2.6.13▲ 7u51-2.4.6▲ 6b41-1.13.13▲ 6b31-1.13.3▲ 1.21.0.7.6▲ 1.17.0.15.6▲ 1.11.0.27.6▲ 1.8.452▲ 1.8.0.452▲2 1.8.0-452▲ 1.8.0.452_p09▲ 1.8.0.452.b09▲4 1.8.0.452.b06▲ 1.8.0_442▲ 1.8.0.442▲ 1.8.0.442.b06▲2 1.8.0.432▲ 1.8.0.432.b06▲3 1.8.0.422▲ 1.8.0.422.b06▲ 1.8.0.422.b05▲2 1.8.0.412▲ 1.8.0.412.b08▲3 1.8.0.412.b06▲ 1.8.0.402▲ 1.8.0.402.b06▲3 1.8.0.392▲ 1.8.0.392.b08▲3 1.8.0.382▲ 1.8.0.382.b05▲3 1.8.0.372▲ 1.8.0.372.b07▲3 1.8.0.362▲ 1.8.0.362.b09▲3 1.8.0.362.b08▲2 1.8.0.362.b01▲ 1.8.0.352▲ 1.8.0.352.b08▲3 1.8.0.345▲ 1.8.0.345.b01▲2 1.8.0.342.b07▲2 1.8.0.332▲ 1.8.0.332.b09▲3 1.8.0.322▲ 1.8.0.322.b06▲ 1.8.0.312.b07▲3 1.8.0.312.b02▲ 1.8.0.312.b01▲ 1.8.0.302▲ 1.8.0.302.b08▲2 1.8.0.302.b04▲ 1.8.0.302.b03▲ 1.8.0.302.b02▲ 1.8.0.302.b01▲ 1.8.0.292.b10▲3 1.8.0.292.b04▲ 1.8.0.292.b01▲ 1.8.0.282.b08▲2 1.8.0.282.b04▲ 1.8.0.275.b01▲ 1.8.0.272.b10▲2 1.8.0.265.b01▲2 1.8.0.262.b10▲ 1.8.0.252-p09▲ 1.8.0.252.b09▲2 1.8.0.252.b02▲ 1.8.0.242.b08▲2 1.8.0.242.b07▲ 1.8.0.232.b09▲2 1.8.0.222.b10▲2 1.8.0.222.b03▲2 1.8.0.212.b04▲3 1.8.0.201.b09▲2 1.8.0.191.b12▲2 1.8.0.181▲2 1.8.0.171▲2 1.8.0.161▲2 1.8.0.151▲2 1.8.0.144▲ 1.8.0.141▲ 1.8.0.131▲ 1.8.0.121▲ 1.8.0.111▲ 1.8.0.102▲ 1.8.0.101▲ 1.8.0.91▲ 1.8.0.77▲ 1.8.0.71▲ 1.8.0.65▲ 1.8.0.60▲ 1.8.0.51▲ 1.8.0.45▲ 1.8.0.31▲ 1.8.u442_b00▲ 1.8.u242_b8▲ 1.8.u40_b27▲ 1.7.0.321▲ 1.7.0.261▲2 1.7.0.251▲2 1.7.0.241▲2 1.7.0.231▲2 1.7.0.221▲3 1.7.0.211▲2 1.7.0.201▲2 1.7.0.191▲2 1.7.0.181▲2 1.7.0.171▲2 1.7.0.161▲2 1.7.0.151▲ 1.7.0.141▲ 1.7.0.131▲ 1.7.0.121▲ 1.7.0.111▲2 1.7.0.101▲ 1.7.0.99▲ 1.7.0.95▲ 1.7.0.91▲ 1.7.0.85▲ 1.7.0.79▲ 1.7.0.75▲ 1.7.0.71▲ 1.7.0.65▲ 1.7.0.55▲ 1.7.0.51▲ 1.7.0.45▲ 1.7.u80_b32▲ 1.7_u80_b02▲ 1.6.0.41▲2 1.6.0.40▲ 1.6.0.39▲ 1.6.0.38▲ 1.6.0.37▲ 1.6.0.36▲ 1.6.0.35▲ 1.6.0.34▲ 1.6.0.33▲ 1.6.0.0▲ r450802▲ jdk-15.0.2+7_openj9-0.24.0▲ jdk-14.0.2+12_openj9-0.21.0▲ jdk-11.0.9.1+1▲ | ||
| openjfx∗ | 25.21 23.0.1.u4 | 14 | 25.21 | 24.0.1 23+ga 22.0.2+ga 21.0.7 21.0.5+0 21.0.5 21.0.5.u0 21.0.3_p1 21 17.0.16.u1 17.0.13.0 17.0.13+0 17.0.12 17.0.11.03 17.0.10.2 17.0.10.0.7 17.0.8.0 17.0.0.12 14.0.2.1+1 13.u14 11.0.20+1 11.0.20.u1 11.0.18.0 11.0.11+1 11.0.11_p1 11.0.11+0 11.0.9.22 11.0.7+0 11.0.3 11.0.2+1 11.0.2 8.1000 8.0.2024 8.0.152 8u370 8u353 8.u202 8u202+ga 8u161-b12 8u60-b27 | |
| orange-data-mining∗ | 3.37.0 | 7 | 3.39.03 | 3.38.13 3.38.0 3.37.02 3.35.0 3.32.0 3.31.1 | |
| orthofinder | 3.0.1b1 | 2 | 2.5.5 | ||
| outils∗ | 0.14 | 6 | 20200707 | 0.145 0.133 0.12 0.103 | 0.13.r2.g6864fc3 |
| paml∗ | 4.10.9 | 10 | 4.10.92 | 4.10.74 4.10.6 4.9j5 4.9h 4.9g 4.9e 4.8 4.7 | |
| pamlx∗ | 1.3.1 | 2 | 1.3.12 | ||
| parafly | 0.1.0 | 4 | 0.1.04 | 0.0.2013.01.21 | |
| parsimonator∗ | 1.0.2 | 2 | 1.0.22 | ||
| perl:algorithm-c3 | 0.11 | 23 | 0.1117 | 0.103 0.092 0.082 | 0.110.06 0.100.03 |
| perl:aliased | 0.34 | 23 | 0.3416 | 0.313 0.30 | 0.340.05 0.310.0 |
| perl:apache-dbi∗ | 1.12 | 17 | 1.1212 | 1.092 | 1.120.05 |
| perl:bio-db-biofetch | 1.7.3 | 3 | 1.7.32 | ||
| perl:bio-db-gff | 1.7.4 | 3 | 1.7.42 | ||
| perl:bio-db-seqfeature | 1.7.5 | 3 | 1.7.52 | 1.7.4 | |
| perl:bioperl∗ | 1.7.8 | 9 | 1.007008 | 1.007000_006 1.007000_005 1.007000_004 1.007000_003 1.006000_001 1.005009_004 1.005009_003 1.005009_002 1.005009_001 1.7.87 1.7.7 1.6.924 | 1.005002102 1.005002101 1.005002005 1.005002004 1.0050021 |
| perl:data-stag | 0.14 | 15 | 0.1410 | 0.13 | 0.140.05 |
| perl:datetime-format-mysql | 0.08 | 18 | 0.07013 | 0.80.03 0.70.100 0.60.03 0.0811 0.07.012 0.064 0.05 0.043 | 0.0800 |
| perl:declare-constraints-simple | 0.03 | 14 | 0.039 | 0.30.04 | |
| perl:devel-overloadinfo∗ | 0.007 | 25 | 0.00716 0.7.06 | 0.0058 0.5.03 0.4.0 0.004 0.002 | |
| perl:file-share | 0.27 | 18 | 0.2712 | 0.255 0.03 | 0.270.04 0.250.03 |
| perl:graph | 0.9725 | 21 | 0.97357 | 0.9734 0.97323 0.9729 0.97276 0.97262 0.97254 0.9724 0.97222 0.9716 0.97044 0.973.5003 0.973.400 0.973.300 0.973.200 0.972.900 0.972.6002 0.971.600 0.970.4002 0.960.0 0.97.27 0.97.25 0.97.04 0.962 0.91 0.20105 | |
| perl:heap∗ | 0.80 | 22 | 0.8016 | 0.800.07 | |
| perl:lwp-useragent-determined∗ | 1.07 | 15 | 1.0711 | 1.06 1.05 | 1.70.04 |
| perl:math-utils | 1.14 | 12 | 1.148 | 1.13 1.11 | 1.140.04 |
Legend: