Information for spades

Versions

• HEAD
• 3.15.5 (7)
• 3.15.4 (2)
• 3.15.3 (2)
• 3.13.1
• 3.13.0
• 3.11.1

Package names

• SPAdes (2)
• spades (6)

Repositories

• AUR
• BioArch
• Debian 10
• Debian 11
• Debian 12
• Debian 13
• Debian Unstable
• Deepin
• Devuan 3.0
• Devuan 4.0
• Devuan Unstable
• Gentoo Science overlay
• Homebrew
• Kali Linux Rolling
• nixpkgs stable 21.11
• nixpkgs stable 22.05
• nixpkgs stable 22.11
• nixpkgs stable 23.05
• nixpkgs unstable
• Pardus 21
• Parrot
• PureOS Amber
• PureOS landing
• Raspbian Oldstable
• Raspbian Stable
• Raspbian Testing
• SlackBuilds
• Spack
• Trisquel 10.0
• Trisquel 11.0
• Ubuntu 18.04
• Ubuntu 20.04
• Ubuntu 22.04
• Ubuntu 23.04
• Ubuntu 23.10
• Wikidata

Categories

• academic
• misc
• sci-biology
• science
• universe/misc

Licenses

• GNU General Public License, version 2.0
• GPL-2
• GPL-2.0-only
• GPL2
• unknown

Summaries

• De novo de Bruijn genome assembler overcoming uneven coverage
• De novo genome sequence assembly
• SPAdes Genome Assembler
• St. Petersburg genome assembler – is an assembly toolkit containing various assembly pipelines.
• St. Petersburg genome assembler: assembly toolkit containing various assembly pipelines
• bioinformatics software

Maintainers

• afif@debian.org
• bruno@bzizou.net
• crusoe@debian.org
• debian-med-packaging@lists.alioth.debian.org
• emollier@debian.org
• fallback-mnt-spack@repology
• mestia@debian.org
• michael.crusoe@gmail.com
• mmokrejs@fold.natur.cuni.cz
• pumpkincheshire@aur
• satta@debian.org
• sci-biology@gentoo.org
• slackalaxy@gmail.com
• tille@debian.org
• ubuntu-devel-discuss@lists.ubuntu.com

• Group email

Homepage links

• http://cab.spbu.ru/software/spades/^{ok, no IPv6} (5)
• http://cab.spbu.ru/spades^{ok, no IPv6}
• https://cab.spbu.ru/software/spades^{redir, no IPv6}
• https://cab.spbu.ru/software/spades/^{ok, no IPv6} (2)

Repository links

• https://github.com/ablab/spades^{ok, no IPv6}
• https://github.com/ablab/spades.git^{redir, no IPv6}

All package recipes

• https://aur.archlinux.org/cgit/aur.git/tree/PKGBUILD?h=spades^ok
• https://github.com/BioArchLinux/Packages/blob/master/BioArchLinux/spades/PKGBUILD^{ok, no IPv6}
• https://github.com/Homebrew/homebrew-core/blob/master/Formula/spades.rb^{dead (see archive.org)}
• https://github.com/NixOS/nixpkgs/blob/nixos-unstable/pkgs/applications/science/biology/spades/default.nix#L21^{ok, no IPv6}
• https://github.com/NixOS/nixpkgs/blob/release-21.11/pkgs/applications/science/biology/spades/default.nix#L21^{ok, no IPv6}
• https://github.com/NixOS/nixpkgs/blob/release-22.05/pkgs/applications/science/biology/spades/default.nix#L21^{ok, no IPv6}
• https://github.com/NixOS/nixpkgs/blob/release-22.11/pkgs/applications/science/biology/spades/default.nix#L21^{ok, no IPv6}
• https://github.com/NixOS/nixpkgs/blob/release-23.05/pkgs/applications/science/biology/spades/default.nix#L21^{ok, no IPv6}
• https://github.com/spack/spack/blob/develop/var/spack/repos/builtin/packages/spades/package.py^{ok, no IPv6}
• https://gitweb.gentoo.org/proj/sci.git/tree/sci-biology/SPAdes/SPAdes-3.15.3.ebuild^ok

Downloads

• http://cab.spbu.ru/files/release3.15.5/SPAdes-3.15.5.tar.gz^{ok, no IPv6}
• https://cab.spbu.ru/files/release3.15.3/manual.html^{ok, no IPv6}
• https://cab.spbu.ru/files/release3.15.3/rnaspades_manual.html^{ok, no IPv6}
• https://cab.spbu.ru/files/release3.15.3/truspades_manual.html^{ok, no IPv6}
• https://github.com/ablab/spades/releases/download/v3.15.3/SPAdes-3.15.3.tar.gz^{ok, no IPv6}
• https://github.com/ablab/spades/releases/download/v3.15.5/SPAdes-3.15.5.tar.gz^{ok, no IPv6} (2)