Information for sortmerna

Versions

• 2017-07-13
• 4.3.6+git20221026.1.2ac819a
• 4.3.6
• 4.3.4
• 4.2.0
• 2.1 (2)
• 2.0

Package names

• sortmerna (5)

Repositories

• Debian 10
• Debian 11
• Debian 12
• Debian 13
• Debian Unstable
• Debian Janitor - Snapshots
• Deepin
• Devuan 3.0
• Devuan 4.0
• Devuan Unstable
• GNU Guix
• Homebrew tap Brewsci/bio
• Kali Linux Rolling
• nixpkgs stable 21.11
• nixpkgs stable 22.05
• nixpkgs stable 22.11
• nixpkgs stable 23.05
• nixpkgs stable 23.11
• nixpkgs unstable
• Pardus 21
• Parrot
• PureOS Amber
• PureOS landing
• Raspbian Oldstable
• Raspbian Stable
• Raspbian Testing
• Spack
• Trisquel 10.0
• Trisquel 11.0
• Ubuntu 16.04
• Ubuntu 18.04
• Ubuntu 20.04
• Ubuntu 22.04
• Ubuntu 23.04
• Ubuntu 23.10

Categories

• misc
• science
• universe/misc

Licenses

• LGPL-3.0

Summaries

• Biological sequence analysis tool for NGS reads
• Filter metatranscriptomic ribosomal RNA
• Tools for filtering, mapping, and OTU-picking from shotgun genomics data

Maintainers

• debian-med-packaging@lists.alioth.debian.org
• emollier@debian.org
• fallback-mnt-spack@repology
• luis@luispedro.org
• tbooth@ceh.ac.uk
• tille@debian.org
• ubuntu-devel-discuss@lists.ubuntu.com

• Group email

Homepage links

• http://bioinfo.lifl.fr/RNA/sortmerna/^{ok, no IPv6}
• https://bioinfo.lifl.fr/RNA/sortmerna/^{redir, no IPv6} (4)
• https://github.com/biocore/sortmerna^{redir, no IPv6}

Repository links

• https://github.com/biocore/sortmerna/archive/2.1b.tar.gz^{redir, no IPv6}

All package recipes

• https://git.savannah.gnu.org/cgit/guix.git/tree/gnu/packages/bioinformatics.scm#n9171^ok
• https://github.com/brewsci/homebrew-bio/blob/master/Formula/sortmerna.rb^{ok, no IPv6}
• https://github.com/NixOS/nixpkgs/blob/nixos-unstable/pkgs/applications/science/biology/sortmerna/default.nix#L38^{ok, no IPv6}
• https://github.com/NixOS/nixpkgs/blob/release-21.11/pkgs/applications/science/biology/sortmerna/default.nix#L39^{ok, no IPv6}
• https://github.com/NixOS/nixpkgs/blob/release-22.05/pkgs/applications/science/biology/sortmerna/default.nix#L39^{ok, no IPv6}
• https://github.com/NixOS/nixpkgs/blob/release-22.11/pkgs/applications/science/biology/sortmerna/default.nix#L39^{ok, no IPv6}
• https://github.com/NixOS/nixpkgs/blob/release-23.05/pkgs/applications/science/biology/sortmerna/default.nix#L39^{ok, no IPv6}
• https://github.com/NixOS/nixpkgs/blob/release-23.11/pkgs/applications/science/biology/sortmerna/default.nix#L38^{ok, no IPv6}
• https://github.com/spack/spack/blob/develop/var/spack/repos/builtin/packages/sortmerna/package.py^{ok, no IPv6}

Downloads

• https://github.com/biocore/sortmerna^{redir, no IPv6}

Patches

• https://github.com/spack/spack/blob/develop/var/spack/repos/builtin/packages/sortmerna/for_aarch64.patch^{ok, no IPv6}