Information for cd-hit

Versions

• 4.8.1 (9)
• 4.6.8 (2)
• 4.6.6 (2)
• 4.6.4
• 4.6.1-2012-08-27
• 4.5.7

Package names

• cd-hit (7)
• cdhit (4)

Repositories

• AUR
• Debian 8
• Debian 9
• Debian 10
• Debian 11
• Debian 12
• Debian Unstable
• Deepin
• Devuan 1.0
• Devuan 2.0
• Devuan 3.0
• Devuan 4.0
• Devuan Unstable
• DPorts
• FreeBSD Ports
• Funtoo 1.4
• Gentoo
• GNU Guix
• Homebrew tap Brewsci/bio
• Kali Linux Rolling
• LiGurOS stable
• LiGurOS develop
• MacPorts
• nixpkgs stable 21.05
• nixpkgs stable 21.11
• nixpkgs unstable
• Pardus 17
• Pardus 19
• Pardus 21
• Parrot
• pkgsrc current
• PureOS Amber
• PureOS landing
• Raspbian Oldstable
• Raspbian Stable
• Raspbian Testing
• Spack
• Trisquel 6.0
• Trisquel 7.0
• Trisquel 8.0
• Trisquel 9.0
• Trisquel 10.0
• Ubuntu 14.04
• Ubuntu 16.04
• Ubuntu 18.04
• Ubuntu 20.04
• Ubuntu 21.04
• Ubuntu 21.10
• Ubuntu 22.04
• YACP

Categories

• Science
• biology (2)
• misc
• sci-biology
• science (2)
• universe/science

Licenses

• GPL-2 (2)
• GPL-2.0
• GPL2

Summaries

• A program for clustering and comparing protein or nucleotide sequences
• Cluster and compare protein or nucleotide sequences (2)
• Clustering Database at High Identity with Tolerance (2)
• Clustering and comparing protein or nucleotide sequences (3)
• clustering DNA/protein sequence database at high identity with tolerance

Maintainers

• bacon@netbsd.org
• bruno@bzizou.net
• debian-med-packaging@lists.alioth.debian.org
• emollier@debian.org
• fallback-mnt-aur@repology
• fallback-mnt-spack@repology
• jwb@freebsd.org
• reneeotten@github
• reneeotten@macports
• sci-biology@gentoo.org
• tbooth@ceh.ac.uk
• tille@debian.org

• Group email

Homepage links

• http://cd-hit.org/⁴⁶ (2)
• http://weizhong-lab.ucsd.edu/cd-hit/⁴⁶ (4)
• http://weizhongli-lab.org/cd-hit/⁴⁶ (5)
• https://code.google.com/p/cdhit/⁴⁶
• https://github.com/weizhongli/cdhit⁴⁶ (2)

All package recipes

• http://cvsweb.netbsd.org/bsdweb.cgi/~checkout~/pkgsrc/biology/cdhit/Makefile?content-type=text/plain⁴⁶
• https://aur.archlinux.org/cgit/aur.git/tree/PKGBUILD?h=cd-hit⁴⁶
• https://cgit.freebsd.org/ports/plain/biology/cd-hit/Makefile⁴⁶
• https://git.savannah.gnu.org/cgit/guix.git/tree/gnu/packages/bioinformatics.scm#n2506⁴⁶
• https://github.com/brewsci/homebrew-bio/blob/master/Formula/cd-hit.rb⁴⁶
• https://github.com/DragonFlyBSD/DPorts/blob/master/biology/cd-hit/Makefile⁴⁶
• https://github.com/funtoo/science-kit/blob/1.4-release/sci-biology/cd-hit/cd-hit-4.6.6.ebuild⁴⁶
• https://github.com/macports/macports-ports/blob/master/science/cdhit/Portfile⁴⁶
• https://github.com/NixOS/nixpkgs/blob/nixos-unstable/pkgs/applications/science/biology/cd-hit/default.nix#L32⁴⁶
• https://github.com/NixOS/nixpkgs/blob/release-21.05/pkgs/applications/science/biology/cd-hit/default.nix#L32⁴⁶
• https://github.com/NixOS/nixpkgs/blob/release-21.11/pkgs/applications/science/biology/cd-hit/default.nix#L32⁴⁶
• https://github.com/spack/spack/blob/develop/var/spack/repos/builtin/packages/cdhit/package.py⁴⁶
• https://gitlab.com/liguros/liguros-repo/-/blob/develop/sci-biology/cd-hit/cd-hit-4.6.6.ebuild⁴⁶
• https://gitlab.com/liguros/liguros-repo/-/blob/stable/sci-biology/cd-hit/cd-hit-4.6.6.ebuild⁴⁶
• https://gitweb.gentoo.org/repo/gentoo.git/tree/sci-biology/cd-hit/cd-hit-4.6.6.ebuild⁴⁶

Downloads

• https://github.com/weizhongli/cdhit/archive/V4.8.1.tar.gz⁴⁶
• https://github.com/weizhongli/cdhit/releases/download/V4.6.6/cd-hit-v4.6.6-2016-0711.tar.gz⁴⁶
• https://github.com/weizhongli/cdhit/releases/download/V4.6.8/cd-hit-v4.6.8-2017-0621-source.tar.gz⁴⁶

Build logs

• https://sting.dragonflybsd.org/dports/logs/biology___cd-hit.log⁴⁶