Information for bedops

Versions

• 2.4.41 (6)
• 2.4.40 (2)
• 2.4.39 (2)
• 2.4.37
• 2.4.35
• 2.4.26 (2)

Package names

• bedops (7)

Repositories

• AUR
• BioArch
• Debian 10
• Debian 11
• Debian 12
• Debian Unstable
• Deepin
• Devuan 3.0
• Devuan 4.0
• Devuan Unstable
• Gentoo Science overlay
• GNU Guix
• Homebrew
• Kali Linux Rolling
• nixpkgs stable 21.11
• nixpkgs stable 22.05
• nixpkgs stable 22.11
• nixpkgs unstable
• Pardus 21
• Parrot
• PureOS Amber
• PureOS landing
• Raspbian Oldstable
• Raspbian Stable
• Raspbian Testing
• Spack
• Trisquel 10.0
• Trisquel 11.0
• Ubuntu 18.04
• Ubuntu 20.04
• Ubuntu 22.04
• Ubuntu 22.10
• Ubuntu 23.04
• Ubuntu 23.10

Categories

• misc
• sci-biology
• universe/misc

Licenses

• GPL
• GPL-2
• GPL-2.0-only

Summaries

• Highly scalable genomic feature operations. https://doi.org/10.1093/bioinformatics/bts277
• Manipulate BED file (alternative to bedtools)
• Set and statistical operations on genomic data of arbitrary scale
• Suite of tools for addressing questions arising in genomics studies
• Tools for high-performance genomic feature operations

Maintainers

• cu@cua0.org
• debian-med-packaging@lists.alioth.debian.org
• jacorvar@spack
• malacology@aur
• mmokrejs@fold.natur.cuni.cz
• osallou@debian.org
• sci-biology@gentoo.org

• Group email

Homepage links

• http://bedops.readthedocs.io/^ok
• http://github.com/bedops/bedops/^{redir, no IPv6}
• https://bedops.readthedocs.io/^ok
• https://github.com/bedops/bedops^{ok, no IPv6} (5)

All package recipes

• https://aur.archlinux.org/cgit/aur.git/tree/PKGBUILD?h=bedops^ok
• https://git.savannah.gnu.org/cgit/guix.git/tree/gnu/packages/bioinformatics.scm#n370^ok
• https://github.com/BioArchLinux/Packages/blob/master/BioArchLinux/bedops/PKGBUILD^{ok, no IPv6}
• https://github.com/Homebrew/homebrew-core/blob/master/Formula/bedops.rb^{ok, no IPv6}
• https://github.com/NixOS/nixpkgs/blob/nixos-unstable/pkgs/applications/science/biology/bedops/default.nix#L57^{ok, no IPv6}
• https://github.com/NixOS/nixpkgs/blob/release-21.11/pkgs/applications/science/biology/bedops/default.nix#L44^{ok, no IPv6}
• https://github.com/NixOS/nixpkgs/blob/release-22.05/pkgs/applications/science/biology/bedops/default.nix#L44^{ok, no IPv6}
• https://github.com/NixOS/nixpkgs/blob/release-22.11/pkgs/applications/science/biology/bedops/default.nix#L44^{ok, no IPv6}
• https://github.com/spack/spack/blob/develop/var/spack/repos/builtin/packages/bedops/package.py^{ok, no IPv6}
• https://gitweb.gentoo.org/proj/sci.git/tree/sci-biology/bedops/bedops-2.4.26.ebuild^ok
• https://gitweb.gentoo.org/proj/sci.git/tree/sci-biology/bedops/bedops-2.4.39.ebuild^ok

Downloads

• https://github.com/bedops/bedops^{ok, no IPv6}
• https://github.com/bedops/bedops/archive/v2.4.26.tar.gz^{ok, no IPv6}
• https://github.com/bedops/bedops/archive/v2.4.39.tar.gz^{ok, no IPv6}
• https://github.com/bedops/bedops/archive/v2.4.41.tar.gz^{ok, no IPv6}