bcftools packages

64 package(s) known

AUR

bcftools

1.18 (1.18-1)

Summary:
A program for variant calling and manipulating files in the Variant Call Format (VCF) and its binary counterpart BCF
Maintainer:
- meanjollies@aur
License:
- GPL
Link(s):

AUR

bcftools-git

1.17.r18.g60c65eb9 (1.17.r18.g60c65eb9-1)

Summary:
Tools for variant calling and manipulating VCFs and BCFs
Maintainer:
- chocobo1@aur
License:
- custom
Link(s):

BioArch

bcftools

1.18 (1.18-2)

Summary:
A program for variant calling and manipulating files in the Variant Call Format (VCF) and its binary counterpart BCF
License:
- GPL
Link(s):

Debian 10
^buster/main

bcftools

1.9 (1.9-1)

Maintainers:
- debian-med-packaging@lists.alioth.debian.org
- afif@debian.org
Category:
- misc
Link(s):

Debian 11
^{bullseye/main}

bcftools

1.11 (1.11-1)

Maintainers:
- debian-med-packaging@lists.alioth.debian.org
- crusoe@debian.org
Category:
- misc
Link(s):

Debian 12
^{bookworm/main}

bcftools

1.16 (1.16-1)

Debian 13
^trixie/main

bcftools

1.17 (1.17-1)

Debian Unstable
^sid/main

bcftools

1.17 (1.17-1)

Deepin
^main

bcftools

1.9 (1.9-1)

Maintainers:
- debian-med-packaging@lists.alioth.debian.org
- afif@debian.org
Link(s):
- Upstream homepage^ok

Devuan 3.0
^beowulf/main

bcftools

1.9 (1.9-1)

Maintainers:
- debian-med-packaging@lists.alioth.debian.org
- afif@debian.org
Category:
- misc
Link(s):
- Upstream homepage^ok

Devuan 4.0
^{chimaera/main}

bcftools

1.11 (1.11-1)

Maintainers:
- debian-med-packaging@lists.alioth.debian.org
- crusoe@debian.org
Category:
- misc
Link(s):
- Upstream homepage^ok

Devuan Unstable
^{unstable/main}

bcftools

1.17 (1.17-1)

EPEL 7

bcftools

1.9 (1.9-3.el7)

Summary:
Tools for genomic variant calling and manipulating VCF/BCF files
Category:
- Unspecified
License:
- GPLv3+
Link(s):
- Package page^ok
- Package sources^{ok, no IPv6}
- Package recipe^{ok, no IPv6}
- Package recipe (raw)^{ok, no IPv6}
- Other^{ok, no IPv6}
- Upstream homepage^ok

EPEL 8

bcftools

1.9 (1.9-3.el8)

Summary:
Tools for genomic variant calling and manipulating VCF/BCF files
Category:
- Unspecified
License:
- GPLv3+
Link(s):
- Package page^ok
- Package sources^{ok, no IPv6}
- Package recipe^{ok, no IPv6}
- Package recipe (raw)^{ok, no IPv6}
- Other^{ok, no IPv6}
- Upstream homepage^ok

Fedora 30
^updates

bcftools

1.9 (1.9-1.fc30)

Summary:
Tools for genomic variant calling and manipulating VCF/BCF files
Category:
- Unspecified
License:
- GPLv3+
Link(s):
- Package page^ok
- Package sources^{ok, no IPv6}
- Package recipe^{ok, no IPv6}
- Package recipe (raw)^{ok, no IPv6}
- Other^{ok, no IPv6}
- Upstream homepage^ok

Fedora 31
^updates

bcftools

1.9 (1.9-1.fc31)

Summary:
Tools for genomic variant calling and manipulating VCF/BCF files
Category:
- Unspecified
License:
- GPLv3+
Link(s):
- Package page^ok
- Package sources^{ok, no IPv6}
- Package recipe^{ok, no IPv6}
- Package recipe (raw)^{ok, no IPv6}
- Other^{ok, no IPv6}
- Upstream homepage^ok

Fedora 32
^release

bcftools

1.9 (1.9-2.fc32)

Summary:
Tools for genomic variant calling and manipulating VCF/BCF files
Category:
- Unspecified
License:
- GPLv3+
Link(s):
- Package page^ok
- Package sources^{ok, no IPv6}
- Package recipe^{ok, no IPv6}
- Package recipe (raw)^{ok, no IPv6}
- Other^{ok, no IPv6}
- Upstream homepage^ok

Fedora 33
^release

bcftools

1.9 (1.9-5.fc33)

Summary:
Tools for genomic variant calling and manipulating VCF/BCF files
Category:
- Unspecified
License:
- GPLv3+
Link(s):
- Package page^ok
- Package sources^{ok, no IPv6}
- Package recipe^{ok, no IPv6}
- Package recipe (raw)^{ok, no IPv6}
- Other^{ok, no IPv6}
- Upstream homepage^ok

Fedora 34
^release

bcftools

1.9 (1.9-6.fc34)

Summary:
Tools for genomic variant calling and manipulating VCF/BCF files
Category:
- Unspecified
License:
- GPLv3+
Link(s):
- Package page^ok
- Package sources^{ok, no IPv6}
- Package recipe^{ok, no IPv6}
- Package recipe (raw)^{ok, no IPv6}
- Other^{ok, no IPv6}
- Upstream homepage^ok

Fedora 35
^release

bcftools

1.13 (1.13-1.fc35)

Summary:
Tools for genomic variant calling and manipulating VCF/BCF files
Category:
- Unspecified
License:
- GPLv3+
Link(s):
- Package page^ok
- Package sources^{ok, no IPv6}
- Package recipe^{ok, no IPv6}
- Package recipe (raw)^{ok, no IPv6}
- Other^{ok, no IPv6}
- Upstream homepage^ok

Fedora 36
^release

bcftools

1.13 (1.13-1.fc35)

Summary:
Tools for genomic variant calling and manipulating VCF/BCF files
Category:
- Unspecified
License:
- GPLv3+
Link(s):
- Package page^ok
- Package sources^{ok, no IPv6}
- Package recipe^{ok, no IPv6}
- Package recipe (raw)^{ok, no IPv6}
- Other^{ok, no IPv6}
- Upstream homepage^ok

Fedora 37
^release

bcftools

1.13 (1.13-4.fc37)

Summary:
Tools for genomic variant calling and manipulating VCF/BCF files
Category:
- Unspecified
License:
- GPLv3+
Link(s):
- Package page^ok
- Package sources^{ok, no IPv6}
- Package recipe^{ok, no IPv6}
- Package recipe (raw)^{ok, no IPv6}
- Other^{ok, no IPv6}
- Upstream homepage^ok

Fedora 38
^release

bcftools

1.15.1 (1.15.1-3.fc38)

Summary:
Tools for genomic variant calling and manipulating VCF/BCF files
Category:
- Unspecified
License:
- GPLv3+
Link(s):
- Package page^ok
- Package sources^{ok, no IPv6}
- Package recipe^{ok, no IPv6}
- Package recipe (raw)^{ok, no IPv6}
- Other^{ok, no IPv6}
- Upstream homepage^ok

Fedora 39
^development

bcftools

1.15.1 (1.15.1-5.fc39)

Summary:
Tools for genomic variant calling and manipulating VCF/BCF files
Category:
- Unspecified
License:
- GPLv3+
Link(s):
- Package page^ok
- Package sources^{ok, no IPv6}
- Package recipe^{ok, no IPv6}
- Package recipe (raw)^{ok, no IPv6}
- Other^{ok, no IPv6}
- Upstream homepage^ok

Fedora Rawhide
^development

bcftools

1.15.1 (1.15.1-5.fc39)

Summary:
Tools for genomic variant calling and manipulating VCF/BCF files
Category:
- Unspecified
License:
- GPLv3+
Link(s):
- Package page^ok
- Package sources^{ok, no IPv6}
- Package recipe^{ok, no IPv6}
- Package recipe (raw)^{ok, no IPv6}
- Other^{ok, no IPv6}
- Upstream homepage^ok

FreeBSD Ports

biology/bcftools

1.17

Summary:
Tools for manipulating next-generation sequencing data
Maintainer:
- jwb@freebsd.org
Category:
- biology
Link(s):

Gentoo

sci-biology/bcftools

1.17

Summary:
Utilities for variant calling and manipulating VCF and BCF files
Maintainer:
- sci-biology@gentoo.org
Category:
- sci-biology
License:
- MIT
Link(s):

GNU Guix

bcftools

1.14

Summary:
Utilities for variant calling and manipulating VCFs and BCFs
Link(s):

GNU Guix

bcftools

1.12

Summary:
Utilities for variant calling and manipulating VCFs and BCFs
Link(s):

GNU Guix

bcftools

1.10

Summary:
Utilities for variant calling and manipulating VCFs and BCFs
Link(s):

Homebrew

bcftools

1.18

Summary:
Tools for BCF/VCF files and variant calling from samtools
Link(s):

Kali Linux Rolling
^main

bcftools

1.17 (1.17-1)

LiGurOS stable

sci-biology/bcftools

1.17

Summary:
Utilities for variant calling and manipulating VCF and BCF files
Maintainer:
- sci-biology@gentoo.org
Category:
- sci-biology
License:
- MIT
Link(s):

LiGurOS develop

sci-biology/bcftools

1.17

Summary:
Utilities for variant calling and manipulating VCF and BCF files
Maintainer:
- sci-biology@gentoo.org
Category:
- sci-biology
License:
- MIT
Link(s):

MacPorts

bcftools

1.18

Summary:
utilities for variant calling and manipulating VCF and BCF files
Maintainers:
- ryandesign@macports
- ryandesign@github
Category:
- science
Licenses:
- MIT
- GPL-3
Link(s):

MSYS2 mingw
^x86_64

mingw-w64-x86_64-bcftools

1.18 (1.18-1)

Summary:
tools for manipulating next-generation sequencing data
License:
- custom
Link(s):

nixpkgs stable 21.11

bcftools

1.14

Summary:
Tools for manipulating BCF2/VCF/gVCF format, SNP and short indel sequence variants
Maintainer:
- miguel.madrid.mencia@gmail.com
License:
- MIT
Link(s):
- Package recipe^{ok, no IPv6}
- Upstream homepage^ok

nixpkgs stable 22.05

bcftools

1.15

Summary:
Tools for manipulating BCF2/VCF/gVCF format, SNP and short indel sequence variants
Maintainer:
- miguel.madrid.mencia@gmail.com
License:
- MIT
Link(s):
- Package recipe^{dead (see archive.org)}
- Upstream homepage^ok

nixpkgs stable 22.11

bcftools

1.16

Summary:
Tools for manipulating BCF2/VCF/gVCF format, SNP and short indel sequence variants
Maintainer:
- miguel.madrid.mencia@gmail.com
License:
- MIT
Link(s):
- Package recipe^{ok, no IPv6}
- Upstream homepage^ok

nixpkgs stable 23.05

bcftools

1.17

Summary:
Tools for manipulating BCF2/VCF/gVCF format, SNP and short indel sequence variants
Maintainer:
- miguel.madrid.mencia@gmail.com
License:
- MIT
Link(s):
- Package recipe^{ok, no IPv6}
- Upstream homepage^ok

nixpkgs unstable

bcftools

1.18

Summary:
Tools for manipulating BCF2/VCF/gVCF format, SNP and short indel sequence variants
Maintainer:
- miguel.madrid.mencia@gmail.com
License:
- MIT
Link(s):
- Package recipe^{ok, no IPv6}
- Upstream homepage^ok

openSUSE Leap 15.5
^main/oss

bcftools

1.16 (1.16-bp155.1.5)

Summary:
Tools for manipulating variant calls in the Variant Call Format (VCF)
Category:
- Productivity/Scientific/Other
License:
- MIT
Link(s):

openSUSE Tumbleweed
^src-oss

bcftools

1.16 (1.16-1.4)

Summary:
Tools for manipulating variant calls in the Variant Call Format (VCF)
Category:
- Productivity/Scientific/Other
License:
- MIT
Link(s):

openSUSE science Tumbleweed

bcftools

1.16 (1.16-13.31)

Summary:
Tools for manipulating variant calls in the Variant Call Format (VCF)
Category:
- Productivity/Scientific/Other
License:
- MIT
Link(s):

Pardus 21
^main

bcftools

1.11 (1.11-1)

Maintainers:
- debian-med-packaging@lists.alioth.debian.org
- crusoe@debian.org
Category:
- misc
Link(s):
- Upstream homepage^ok

Parrot
^{parrot-updates/main}

bcftools

1.11 (1.11-1)

Maintainers:
- debian-med-packaging@lists.alioth.debian.org
- crusoe@debian.org
Category:
- misc
Link(s):
- Upstream homepage^ok

Parrot
^parrot/main

bcftools

1.11 (1.11-1)

Maintainers:
- debian-med-packaging@lists.alioth.debian.org
- crusoe@debian.org
Category:
- misc
Link(s):
- Upstream homepage^ok

pkgsrc current

biology/bcftools

1.17 (1.17nb1)

Summary:
Tools for manipulating BCF and VCF variant call files
Maintainer:
- fallback-mnt-pkgsrc@repology
Category:
- biology
Link(s):

PureOS Amber

bcftools

1.9 (1.9-1)

Maintainers:
- debian-med-packaging@lists.alioth.debian.org
- afif@debian.org
Category:
- science
Link(s):
- Upstream homepage^ok

PureOS landing

bcftools

1.16 (1.16-1)

Raspbian Oldstable
^main

bcftools

1.11 (1.11-1)

Maintainers:
- debian-med-packaging@lists.alioth.debian.org
- crusoe@debian.org
Category:
- misc
Link(s):
- Upstream homepage^ok

Raspbian Stable
^main

bcftools

1.13 (1.13-1)

Raspbian Testing
^main

bcftools

1.13 (1.13-1)

SlackBuilds

academic/bcftools

1.17

Maintainer:
- sborg63@disroot.org
Category:
- academic
Link(s):

Spack

bcftools

1.16

Maintainer:
- fallback-mnt-spack@repology
Link(s):
- Package page^redir
- Package sources^{ok, no IPv6}
- Package recipe^{ok, no IPv6}
- Package recipe (raw)^ok
- Patch^{ok, no IPv6}
- Patch^{ok, no IPv6}
- Patch^{ok, no IPv6}
- Patch^{ok, no IPv6}
- Patch^{ok, no IPv6}
- Patch (raw)^ok
- Patch (raw)^ok
- Patch (raw)^ok
- Patch (raw)^ok
- Patch (raw)^ok
- Upstream homepage^ok
- Upstream download^{ok, no IPv6}

Trisquel 10.0
^nabia/main

bcftools

1.10.2 (1.10.2-2)

Maintainers:
- debian-med-packaging@lists.alioth.debian.org
- michael.crusoe@gmail.com
Category:
- universe/misc
Link(s):
- Package page^ok
- Upstream homepage^ok

Trisquel 11.0
^aramo/main

bcftools

1.13 (1.13-1)

Maintainers:
Category:
- universe/misc
Link(s):
- Package page^ok
- Upstream homepage^ok

Ubuntu 16.04
^{xenial/universe}

bcftools

1.2 (1.2-2)

Maintainers:
- debian-med-packaging@lists.alioth.debian.org
- afif@ghraoui.name
Category:
- universe/misc
Link(s):

Ubuntu 18.04
^{bionic/universe}

bcftools

1.7 (1.7-2)

Maintainers:
- debian-med-packaging@lists.alioth.debian.org
- afif@debian.org
Category:
- universe/misc
Link(s):

Ubuntu 20.04
^{focal/universe}

bcftools

1.10.2 (1.10.2-2)

Maintainers:
- debian-med-packaging@lists.alioth.debian.org
- michael.crusoe@gmail.com
Category:
- universe/misc
Link(s):

Ubuntu 22.04
^{jammy/universe}

bcftools

1.13 (1.13-1)

Ubuntu 23.04
^{lunar/universe}

bcftools

1.16 (1.16-1)

Ubuntu 23.10
^{mantic/universe}

bcftools

1.17 (1.17-1)

YACP

bcftools

1.17

Summary:
Faster replacement for most of the perl VCFtools commands
Category:
- Science
Link(s):
- Package sources^{ok, no IPv6}
- Upstream homepage^{ok, no IPv6}

Packages for bcftools

bcftools

bcftools-git

bcftools

bcftools

bcftools

bcftools

bcftools

bcftools

bcftools

bcftools

bcftools

bcftools

bcftools

bcftools

bcftools

bcftools

bcftools

bcftools

bcftools

bcftools

bcftools

bcftools

bcftools

bcftools

bcftools

biology/bcftools

sci-biology/bcftools

bcftools

bcftools

bcftools

bcftools

bcftools

sci-biology/bcftools

sci-biology/bcftools

bcftools

mingw-w64-x86_64-bcftools

bcftools

bcftools

bcftools

bcftools

bcftools

bcftools

bcftools

bcftools

bcftools

bcftools

bcftools

biology/bcftools

bcftools

bcftools

bcftools

bcftools

bcftools

academic/bcftools

bcftools

bcftools

bcftools

bcftools

bcftools

bcftools

bcftools

bcftools

bcftools

bcftools