bcftools packages

53 package(s) known

AOSC

bcftools

1.10.2

Summary:
Utilities for variant calling and manipulating VCFs and BCFs
Maintainer:
- fallback-mnt-aosc@repology
Category:
- science
Package-related links:
- Package details
- Package sources on GitHub

AUR

bcftools

1.11 (1.11-1)

Summary:
A program for variant calling and manipulating files in the Variant Call Format (VCF) and its binary counterpart BCF
Maintainer:
- meanjollies@aur
License:
- GPL
Package-related links:
Homepage:
- https://samtools.github.io/bcftools⁴⁶

AUR

bcftools-git

1.10.2.r123.gdc26549 (1.10.2.r123.gdc26549-1)

Summary:
Tools for variant calling and manipulating VCFs and BCFs
Maintainer:
- chocobo1@aur
License:
- custom
Package-related links:
Homepage:
- https://samtools.github.io/bcftools/⁴⁶

Debian Oldstable
^{oldstable/main}

bcftools

1.3.1 (1.3.1-1)

Maintainers:
- debian-med-packaging@lists.alioth.debian.org
- afif@debian.org
Category:
- misc
Package-related links:
Homepage:
- http://samtools.github.io/bcftools/⁴⁶

Debian Stable
^stable/main

bcftools

1.9 (1.9-1)

Maintainers:
- debian-med-packaging@lists.alioth.debian.org
- afif@debian.org
Category:
- misc
Package-related links:
Homepage:
- http://samtools.github.io/bcftools/⁴⁶

Debian Testing
^testing/main

bcftools

1.11 (1.11-1)

Maintainers:
- debian-med-packaging@lists.alioth.debian.org
- crusoe@debian.org
Category:
- misc
Package-related links:
Homepage:
- http://samtools.github.io/bcftools/⁴⁶

Debian Unstable
^main

bcftools

1.11 (1.11-1)

Maintainers:
- debian-med-packaging@lists.alioth.debian.org
- crusoe@debian.org
Category:
- misc
Package-related links:
Homepage:
- http://samtools.github.io/bcftools/⁴⁶

Deepin
^main

bcftools

1.9 (1.9-1)

Maintainers:
- debian-med-packaging@lists.alioth.debian.org
- afif@debian.org
Category:
- misc
Homepage:
- http://samtools.github.io/bcftools/⁴⁶

Devuan 2.0 (ASCII)
^ascii/main

bcftools

1.3.1 (1.3.1-1)

Maintainers:
- debian-med-packaging@lists.alioth.debian.org
- afif@debian.org
Category:
- misc
Homepage:
- http://samtools.github.io/bcftools/⁴⁶

Devuan 3.0 (Beowulf)
^beowulf/main

bcftools

1.9 (1.9-1)

Maintainers:
- debian-med-packaging@lists.alioth.debian.org
- afif@debian.org
Category:
- misc
Homepage:
- http://samtools.github.io/bcftools/⁴⁶

Devuan 4.0 (Chimaera)
^{chimaera/main}

bcftools

1.11 (1.11-1)

Maintainers:
- debian-med-packaging@lists.alioth.debian.org
- crusoe@debian.org
Category:
- misc
Homepage:
- http://samtools.github.io/bcftools/⁴⁶

Devuan Unstable
^{unstable/main}

bcftools

1.11 (1.11-1)

Maintainers:
- debian-med-packaging@lists.alioth.debian.org
- crusoe@debian.org
Category:
- misc
Homepage:
- http://samtools.github.io/bcftools/⁴⁶

DPorts

biology/bcftools

1.10.2

Summary:
Tools for manipulating next-generation sequencing data
Maintainer:
- jwb@freebsd.org
Category:
- biology
Package-related links:
Homepage:
- http://www.htslib.org/⁴⁶

EPEL 7

bcftools

1.9 (1.9-3.el7)

Summary:
Tools for genomic variant calling and manipulating VCF/BCF files
Category:
- Unspecified
License:
- GPLv3+
Package-related links:
- Package details on Fedora Pagure
Homepage:
- https://www.htslib.org/⁴⁶

EPEL 8

bcftools

1.9 (1.9-3.el8)

Summary:
Tools for genomic variant calling and manipulating VCF/BCF files
Category:
- Unspecified
License:
- GPLv3+
Package-related links:
- Package details on Fedora Pagure
Homepage:
- https://www.htslib.org/⁴⁶

Fedora 30
^updates

bcftools

1.9 (1.9-1.fc30)

Summary:
Tools for genomic variant calling and manipulating VCF/BCF files
Category:
- Unspecified
License:
- GPLv3+
Package-related links:
- Package details on Fedora Pagure
- Package details on Fedora Packages
Homepage:
- https://www.htslib.org/⁴⁶

Fedora 31
^updates

bcftools

1.9 (1.9-1.fc31)

Summary:
Tools for genomic variant calling and manipulating VCF/BCF files
Category:
- Unspecified
License:
- GPLv3+
Package-related links:
- Package details on Fedora Pagure
- Package details on Fedora Packages
Homepage:
- https://www.htslib.org/⁴⁶

Fedora 32
^release

bcftools

1.9 (1.9-2.fc32)

Summary:
Tools for genomic variant calling and manipulating VCF/BCF files
Category:
- Unspecified
License:
- GPLv3+
Package-related links:
- Package details on Fedora Pagure
- Package details on Fedora Packages
Homepage:
- https://www.htslib.org/⁴⁶

Fedora 33
^release

bcftools

1.9 (1.9-5.fc33)

Summary:
Tools for genomic variant calling and manipulating VCF/BCF files
Category:
- Unspecified
License:
- GPLv3+
Package-related links:
- Package details on Fedora Pagure
- Package details on Fedora Packages
Homepage:
- https://www.htslib.org/⁴⁶

Fedora Rawhide

bcftools

1.9 (1.9-5.fc33)

Summary:
Tools for genomic variant calling and manipulating VCF/BCF files
Category:
- Unspecified
License:
- GPLv3+
Package-related links:
- Package details on Fedora Pagure
- Package details on Fedora Packages
Homepage:
- https://www.htslib.org/⁴⁶

FreeBSD Ports

biology/bcftools

1.11

Summary:
Tools for manipulating next-generation sequencing data
Maintainer:
- jwb@freebsd.org
Category:
- biology
Package-related links:
Homepage:
- http://www.htslib.org/⁴⁶

Funtoo 1.4
^science-kit

sci-biology/bcftools

1.9

Summary:
Utilities for variant calling and manipulating VCF and BCF files
Maintainers:
- sci-biology@gentoo.org
- mmokrejs@gmail.com
Category:
- sci-biology
License:
- MIT
Homepage:
- http://www.htslib.org/⁴⁶
Download(s):
- https://github.com/samtools/bcftools/releases/download/1.9/bcftools-1.9.tar.bz2⁴⁶

Funtoo 1.4
^science-kit

sci-biology/bcftools

1.5

Summary:
Utilities for variant calling and manipulating VCF and BCF files
Maintainers:
- sci-biology@gentoo.org
- mmokrejs@gmail.com
Category:
- sci-biology
License:
- MIT
Homepage:
- http://www.htslib.org/⁴⁶
Download(s):
- https://github.com/samtools/bcftools/releases/download/1.5/bcftools-1.5.tar.bz2⁴⁶

Gentoo

sci-biology/bcftools

1.10.2

Summary:
Utilities for variant calling and manipulating VCF and BCF files
Maintainer:
- sci-biology@gentoo.org
Category:
- sci-biology
License:
- MIT
Package-related links:
- Package details
- View ebuild
Homepage:
- http://www.htslib.org/⁴⁶
Download(s):
- https://github.com/samtools/bcftools/releases/download/1.10.2/bcftools-1.10.2.tar.bz2⁴⁶

GNU Guix

bcftools

1.11

Summary:
Utilities for variant calling and manipulating VCFs and BCFs
Package-related links:
- Package page on Guix site
- Package source in Git
Homepage:
- https://samtools.github.io/bcftools/⁴⁶
Download(s):
- https://github.com/samtools/bcftools/releases/download/1.11/bcftools-1.11.tar.bz2⁴⁶

GNU Guix

bcftools

1.9

Summary:
Utilities for variant calling and manipulating VCFs and BCFs
Package-related links:
- Package page on Guix site
- Package source in Git
Homepage:
- https://samtools.github.io/bcftools/⁴⁶
Download(s):
- https://github.com/samtools/bcftools/releases/download/1.9/bcftools-1.9.tar.bz2⁴⁶

Homebrew

bcftools

1.11

Summary:
Tools for BCF/VCF files and variant calling from samtools
Package-related links:
- Formula page
- Formula code on GitHub
Homepage:
- https://www.htslib.org/⁴⁶

Kali Linux Rolling
^main

bcftools

1.11 (1.11-1)

Maintainers:
- debian-med-packaging@lists.alioth.debian.org
- crusoe@debian.org
Category:
- misc
Package-related links:
- Git repository
Homepage:
- http://samtools.github.io/bcftools/⁴⁶

LiGurOS 20.7
^nokit

sci-biology/bcftools

1.10.2

Summary:
Utilities for variant calling and manipulating VCF and BCF files
Maintainer:
- sci-biology@gentoo.org
Category:
- sci-biology
License:
- MIT
Package-related links:
- Git directory
- View ebuild
Homepage:
- https://www.htslib.org/⁴⁶
Download(s):
- https://github.com/samtools/bcftools/releases/download/1.10.2/bcftools-1.10.2.tar.bz2⁴⁶

LiGurOS 21.1
^nokit

sci-biology/bcftools

1.10.2

Summary:
Utilities for variant calling and manipulating VCF and BCF files
Maintainer:
- sci-biology@gentoo.org
Category:
- sci-biology
License:
- MIT
Package-related links:
- Git directory
- View ebuild
Homepage:
- https://www.htslib.org/⁴⁶
Download(s):
- https://github.com/samtools/bcftools/releases/download/1.10.2/bcftools-1.10.2.tar.bz2⁴⁶

Linuxbrew

bcftools

1.11

Summary:
Tools for BCF/VCF files and variant calling from samtools
Package-related links:
- Formula page
- Formula code on GitHub
Homepage:
- https://www.htslib.org/⁴⁶

MacPorts

bcftools

1.11

Summary:
utilities for variant calling and manipulating VCF and BCF files
Maintainers:
- ryandesign@macports
- ryandesign@github
Category:
- science
Licenses:
- MIT
- GPL-3
Package-related links:
- Port page on MacPorts.org
- Port directory in GitHub repository
Homepage:
- https://www.htslib.org/⁴⁶

nixpkgs stable

bcftools

1.10.2

Summary:
Tools for manipulating BCF2/VCF/gVCF format, SNP and short indel sequence variants
Maintainer:
- miguel.madrid.mencia@gmail.com
License:
- MIT
Package-related links:
- Package source (release branch)
- Package source (master branch, imprecise link)
Homepage:
- http://www.htslib.org/⁴⁶

nixpkgs unstable

bcftools

1.11

Summary:
Tools for manipulating BCF2/VCF/gVCF format, SNP and short indel sequence variants
Maintainer:
- miguel.madrid.mencia@gmail.com
License:
- MIT
Package-related links:
- Package source
Homepage:
- http://www.htslib.org/⁴⁶

openSUSE Tumbleweed

bcftools

1.10.2 (1.10.2-1.4)

Summary:
Tools for manipulating variant calls in the Variant Call Format (VCF)
Category:
- Productivity/Scientific/Other
License:
- MIT
Package-related links:
- Package in openSUSE Build Service
- Package details on software.opensuse.org
Homepage:
- http://www.htslib.org/⁴⁶

openSUSE Science Tumbleweed

bcftools

1.10.2 (1.10.2-6.17)

Summary:
Tools for manipulating variant calls in the Variant Call Format (VCF)
Category:
- Productivity/Scientific/Other
License:
- MIT
Package-related links:
- Package in openSUSE Build Service
- Package details on software.opensuse.org
Homepage:
- http://www.htslib.org/⁴⁶