Versions
- 1.17.r18.g60c65eb9
- 1.18 (7)
- 1.17 (6)
- 1.16 (4)
- 1.15.1
- 1.15
- 1.14 (2)
- 1.13 (2)
- 1.12
- 1.11
- 1.10.2
- 1.10
- 1.9 (2)
- 1.7
- 1.2
Package names
- bcftools (14)
- bcftools-git
- mingw-w64-bcftools
Categories
- Productivity/Scientific/Other
- Science
- Unspecified
- academic
- biology (2)
- misc
- sci-biology
- science (2)
- universe/misc
Licenses
- GPL
- GPL-3
- GPL-3.0-or-later
- GPLv3+
- MIT (4)
- custom (2)
Summaries
- A program for variant calling and manipulating files in the Variant Call Format (VCF) and its binary counterpart BCF
- Faster replacement for most of the perl VCFtools commands
- Tools for BCF/VCF files and variant calling from samtools
- Tools for genomic variant calling and manipulating VCF/BCF files
- Tools for manipulating BCF and VCF variant call files
- Tools for manipulating BCF2/VCF/gVCF format, SNP and short indel sequence variants
- Tools for manipulating next-generation sequencing data
- Tools for manipulating variant calls in the Variant Call Format (VCF)
- Tools for variant calling and manipulating VCFs and BCFs
- Utilities for variant calling and manipulating VCF and BCF files
- Utilities for variant calling and manipulating VCFs and BCFs
- tools for manipulating next-generation sequencing data
- utilities for variant calling and manipulating VCF and BCF files
All package recipes
- https://aur.archlinux.org/cgit/aur.git/tree/PKGBUILD?h=bcftoolsok
- https://aur.archlinux.org/cgit/aur.git/tree/PKGBUILD?h=bcftools-gitok
- https://build.opensuse.org/package/view_file/openSUSE:Factory/bcftools/bcftools.spec?expand=1ok
- https://build.opensuse.org/package/view_file/openSUSE:Leap:15.5:Update/bcftools/bcftools.spec?expand=1ok
- https://build.opensuse.org/package/view_file/science/bcftools/bcftools.spec?expand=1ok
- https://git.savannah.gnu.org/cgit/guix.git/tree/gnu/packages/bioinformatics.scm#n354ok
- https://git.savannah.gnu.org/cgit/guix.git/tree/gnu/packages/bioinformatics.scm#n337ok
- https://git.savannah.gnu.org/cgit/guix.git/tree/gnu/packages/bioinformatics.scm#n297ok
- https://github.com/BioArchLinux/Packages/blob/master/BioArchLinux/bcftools/PKGBUILDok, no IPv6
- https://github.com/Homebrew/homebrew-core/blob/master/Formula/bcftools.rbdead (see archive.org)
- https://github.com/macports/macports-ports/blob/master/science/bcftools/Portfileok, no IPv6
- https://github.com/msys2/MINGW-packages/blob/master/mingw-w64-bcftools/PKGBUILDok, no IPv6
- https://github.com/NixOS/nixpkgs/blob/nixos-unstable/pkgs/applications/science/biology/bcftools/default.nix#L38ok, no IPv6
- https://github.com/NixOS/nixpkgs/blob/release-21.11/pkgs/applications/science/biology/bcftools/default.nix#L38ok, no IPv6
- https://github.com/NixOS/nixpkgs/blob/release-22.05/pkgs/applications/science/biology/bcftools/default.nix#L38ok, no IPv6
- https://github.com/NixOS/nixpkgs/blob/release-22.11/pkgs/applications/science/biology/bcftools/default.nix#L38ok, no IPv6
- https://github.com/NixOS/nixpkgs/blob/release-23.05/pkgs/applications/science/biology/bcftools/default.nix#L38ok, no IPv6
- https://github.com/NixOS/nixpkgs/blob/release-23.11/pkgs/applications/science/biology/bcftools/default.nix#L38ok, no IPv6
- https://github.com/spack/spack/blob/develop/var/spack/repos/builtin/packages/bcftools/package.pyok, no IPv6
- https://gitlab.com/liguros/liguros-repo/-/blob/develop/sci-biology/bcftools/bcftools-1.17.ebuildok
- https://gitlab.com/liguros/liguros-repo/-/blob/stable/sci-biology/bcftools/bcftools-1.17.ebuildok
- https://gitweb.gentoo.org/repo/gentoo.git/tree/sci-biology/bcftools/bcftools-1.17.ebuildok
- https://src.fedoraproject.org/rpms/bcftools/blob/epel7/f/bcftools.specok, no IPv6
- https://src.fedoraproject.org/rpms/bcftools/blob/epel8/f/bcftools.specok, no IPv6
- https://src.fedoraproject.org/rpms/bcftools/blob/f30/f/bcftools.specok, no IPv6
- https://src.fedoraproject.org/rpms/bcftools/blob/f31/f/bcftools.specok, no IPv6
- https://src.fedoraproject.org/rpms/bcftools/blob/f32/f/bcftools.specok, no IPv6
- https://src.fedoraproject.org/rpms/bcftools/blob/f33/f/bcftools.specok, no IPv6
- https://src.fedoraproject.org/rpms/bcftools/blob/f34/f/bcftools.specok, no IPv6
- https://src.fedoraproject.org/rpms/bcftools/blob/f35/f/bcftools.specok, no IPv6
- https://src.fedoraproject.org/rpms/bcftools/blob/f36/f/bcftools.specok, no IPv6
- https://src.fedoraproject.org/rpms/bcftools/blob/f37/f/bcftools.specok, no IPv6
- https://src.fedoraproject.org/rpms/bcftools/blob/f38/f/bcftools.specok, no IPv6
- https://src.fedoraproject.org/rpms/bcftools/blob/f39/f/bcftools.specok, no IPv6
- https://src.fedoraproject.org/rpms/bcftools/blob/rawhide/f/bcftools.specok, no IPv6
Build logs
- https://kojipkgs.fedoraproject.org/packages/bcftools/1.13/1.fc35/data/logs/ok, no IPv6
- https://kojipkgs.fedoraproject.org/packages/bcftools/1.13/4.fc37/data/logs/ok, no IPv6
- https://kojipkgs.fedoraproject.org/packages/bcftools/1.15.1/3.fc38/data/logs/ok, no IPv6
- https://kojipkgs.fedoraproject.org/packages/bcftools/1.15.1/5.fc39/data/logs/ok, no IPv6
- https://kojipkgs.fedoraproject.org/packages/bcftools/1.15.1/6.fc40/data/logs/ok, no IPv6
- https://kojipkgs.fedoraproject.org/packages/bcftools/1.9/1.fc30/data/logs/ok, no IPv6
- https://kojipkgs.fedoraproject.org/packages/bcftools/1.9/1.fc31/data/logs/ok, no IPv6
- https://kojipkgs.fedoraproject.org/packages/bcftools/1.9/2.fc32/data/logs/ok, no IPv6
- https://kojipkgs.fedoraproject.org/packages/bcftools/1.9/3.el7/data/logs/ok, no IPv6
- https://kojipkgs.fedoraproject.org/packages/bcftools/1.9/3.el8/data/logs/ok, no IPv6
- https://kojipkgs.fedoraproject.org/packages/bcftools/1.9/5.fc33/data/logs/ok, no IPv6
- https://kojipkgs.fedoraproject.org/packages/bcftools/1.9/6.fc34/data/logs/ok, no IPv6