Information for bbmap

Versions

• 39.01 (4)
• 38.95
• 38.92
• 38.90
• 38.87
• 38.79
• 38.63

Package names

• BBmap
• bbmap (5)

Repositories

• AUR
• BioArch
• Debian 10 Backports
• Debian 11
• Debian 12
• Debian 13
• Debian Unstable
• Devuan 4.0
• Devuan Unstable
• FreeBSD Ports
• Gentoo Science overlay
• GNU Guix
• Kali Linux Rolling
• Pardus 21
• Parrot
• PureOS landing
• Raspbian Oldstable
• Raspbian Stable
• Raspbian Testing
• Spack
• Trisquel 10.0
• Trisquel 11.0
• Ubuntu 20.04
• Ubuntu 22.04
• Ubuntu 23.04
• Ubuntu 23.10

Categories

• biology
• misc
• sci-biology
• science
• universe/misc

Licenses

• BSD (2)

Summaries

• A short read aligner and other bioinformatic tools
• Aligner and other tools for short sequencing reads
• BBMap short read aligner, and other bioinformatic tools
• Short read aligner, K-mer-based error-correct and normalize, FASTA/Q tool

Maintainers

• debian-med-packaging@lists.alioth.debian.org
• emollier@debian.org
• fallback-mnt-spack@repology
• jwb@freebsd.org
• malacology@aur
• mmokrejs@fold.natur.cuni.cz
• sci-biology@gentoo.org
• tille@debian.org

• Group email

Homepage links

• https://jgi.doe.gov/data-and-tools/bbtools/^{redir, no IPv6} (2)
• https://sourceforge.net/projects/bbmap/^ok (4)

All package recipes

• https://aur.archlinux.org/cgit/aur.git/tree/PKGBUILD?h=bbmap^ok
• https://git.savannah.gnu.org/cgit/guix.git/tree/gnu/packages/bioinformatics.scm#n17180^ok
• https://github.com/BioArchLinux/Packages/blob/master/BioArchLinux/bbmap/PKGBUILD^{ok, no IPv6}
• https://github.com/spack/spack/blob/develop/var/spack/repos/builtin/packages/bbmap/package.py^{ok, no IPv6}
• https://gitweb.gentoo.org/proj/sci.git/tree/sci-biology/BBmap/BBmap-38.87.ebuild^ok

Downloads

• http://downloads.sourceforge.net/project/bbmap/BBMap_39.01.tar.gz^{ok, no IPv6}
• http://freefr.dl.sourceforge.net/project/bbmap/BBMap_39.01.tar.gz^ok
• http://internode.dl.sourceforge.net/project/bbmap/BBMap_39.01.tar.gz^{ok, no IPv6}
• http://jaist.dl.sourceforge.net/project/bbmap/BBMap_39.01.tar.gz^ok
• http://liquidtelecom.dl.sourceforge.net/project/bbmap/BBMap_39.01.tar.gz^{ok, no IPv6}
• http://nchc.dl.sourceforge.net/project/bbmap/BBMap_39.01.tar.gz^ok
• http://netcologne.dl.sourceforge.net/project/bbmap/BBMap_39.01.tar.gz^ok
• http://netix.dl.sourceforge.net/project/bbmap/BBMap_39.01.tar.gz^{ok, no IPv6}
• http://pilotfiber.dl.sourceforge.net/project/bbmap/BBMap_39.01.tar.gz^{ok, no IPv6}
• http://tenet.dl.sourceforge.net/project/bbmap/BBMap_39.01.tar.gz^ok
• http://ufpr.dl.sourceforge.net/project/bbmap/BBMap_39.01.tar.gz^ok
• https://prdownloads.sourceforge.net/bbmap/BBMap_39.01.tar.gz^{ok, no IPv6}
• https://sourceforge.net/projects/bbmap/files/BBMap_38.87.tar.gz^{redir, no IPv6}