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Repository activity
Categories
This maintainer is active in the following package categories:
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sci-biology (379)
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dev-perl (17)
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sci-libs (15)
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dev-python (5)
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sci-visualization (1)
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dev-util (1)
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dev-libs (1)
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dev-lang (1)
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dev-java (1)
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app-arch (1)
Projects
aaindex, abacas, abyss, act-artemis-comparison-tool, aghermann, align-to-scf, aligngraph, allpathslg, amap-protein, amos, angle, angsd, apollo, arachne, ariadne, assembly-stats, augustus, autoeditor, bam-readcount, bambus, bamql, bamtools, barrnap, bbmap, bcftools, beagle-genotypes-phasing, beaglecall, bedops, bedtools, bfast, biobambam2, biogrep, biopandas, bioperl, bioperl-db, bioperl-network, bioperl-run, biopython, biosql, bismark, blasr, blasttosam, blat, bowtie, bowtie2, braker, branch, brat, brat-bw, brat-nova, bwa, bx-python, caftools, canu, cast, cat, cd-hit, cdbfasta, cg-cat, cgview, chiron, circos, clustal-omega, clustalw, clustalw-mpi, clustalx, cluster-k-means, clview, cnrun, codonw, conform-gt, conrad, consed, coral-seq, cortex-var, cramtools, cross-genome, cutadapt, cutg, dcmtk, deeptools, deeptools-intervals, dialign-tx, dialign2, diamond-aligner, diya, dna2pep, edena, elph, embassy, embassy-cbstools, embassy-clustalomega, embassy-domainatrix, embassy-domalign, embassy-domsearch, embassy-emnu, embassy-esim4, embassy-hmmer, embassy-iprscan, embassy-meme, embassy-mse, embassy-phylipnew, embassy-signature, embassy-structure, embassy-topo, embassy-vienna, emboss, epga, erpin, estscan, eugene, exonerate, exonerate-gff3, express-rna-seq, fahclient, fast5, fasta, fastaq, fastdnaml, fastqc, fasttree, ffindex, finchtv, flash-seq, flexbar, freebayes, fsa, fsl, gal-genome-annotation-library, gatk, gbrowse, gemini, genepop, genomeview, germline, gffcompare, gffread, gffutils, gibbs, glean, glimmer, glimmerhmm, gmap, go:db-perl, goby-cpp, goby-dns-sequencing, grabix, graf, grappa, grass, hexamer, hisat2, hmmer, htseq, htsjdk, htslib, htslib-plugins, idba, iedera, igraph, igv, image, imagej, infernal, insighttoolkit, intermine, iqpnni, irods, jannovar, java-picard, jellyfish-k-mer, jhdf5, jigsaw-seq, jtreeview, kaks-calculator, kalign, kallisto, karect, kat, khmer-sequencing, king-kinship-based-inference, kmergenie, kraken, lagan, last, lastz, lib2bit, libbigwig, libblasr, libdeflate, libgenome, libgtextutils, libmaus2, libmems, libmuscle, libstatgen, lighter, lucy, lumpy-sv, mafft, makefile2graph, maker, manatee-igs, manatee-jcvi, mappy, maq, maqview, masurca, mcl, megahit, meme-motif-discovery, merlin-linkage, mev, mgblast, minced, mip-scaffolder, mira, miranda-microrna, mochiview, molbiolib, mosaik, mothur, mrbayes, mreps, mrfast, mrnamarkup, mrsfast, msautil, mummer, muscle-sequence-alignment, museqbox, nanopolish, ncbi-blast+, ncbi-tools, ncbi-tools++, newick-utils, nextclip, ngsepcore, njplot, nrcl, ntcard, nwalign3, nxtrim, oases, obo-edit, onto-perl, pairagon, pals, paml, paraat, parafly, pbbam, pbcopper, perga, perl:algorithm-loops, perl:bio-bigfile, perl:bio-db-das-chado, perl:bio-db-hts, perl:bio-ensembl, perl:btlib, perl:config-std, perl:dbix-dbstag, perl:librg-utils-perl, perl:log-cabin, perl:scalar-util-numeric, perl:set-intspan-fast, perl:text-graph, perl:text-parsewords, perl:text-recordparser, perl:time-progress, perlprimer, phrap, phred, phusion2, phylip, phyml, picard, piler, pilercr, pileup, pilon, plink, poa, polyphen, portrait, prank, primer3, primerd, prinseq-lite, prints, probcons, proda, prodigal, profnet, profphd, profphd-utils, prokka, proovread, prosite, prot4est, psipred, psx-seq, pufferfish, pybedtools, pyfaidx, pysam, pysamstats, python:bcbio-gff, python:intervaltree, python:py2bit, python:pybigwig, python:xopen, qrna, quast, quicktree, quorum-seq, radtools, raxml, rcorrector, reaper-seq, rebase-enzyme, recon, repeatmasker, repeatmasker-libraries, rmblast, rna-star, rnaplex, rnaview, roche454ace2caf, rseqc, rtg-tools, ruby:bio, ruby:rails, ruffus, rum-rna-mapper, sabre, sailfish, salmon, sambamba, samstat, samtools, scaffolder-evaluation, scan-for-matches, sclust, screed, scythe, seaview, seecer, seqan, seqclean, seqtk, seqtools, sff-dump, sga, shrimp, sibsim4, sickle, signalp, sim4, skewer, smalt, snap-gene-prediction, snpeff, snpomatic, soapdenovo2, solexaqa, spades, sra-sdk, ssaha2, ssake, stacks, staden, staden-doc, starorf, stride, stringtie, subread, swissknife, t-coffee, tagdust, tclust, tigmint, tigr-foundation-libs, tmhmm, tophat, trans-abyss, transdecoder, transfac, tree-puzzle, treeviewx, trf-tandem-repeats-finder, trim-galore, trimmomatic, trinityrnaseq, trinotate, trnascan-se, trowel, twinscan, uchime, ucsc-genome-browser, unafold, update-blastdb, vaal, vague, vcflib, vcftools, velvet, velvetoptimiser, verifybamid, vienna-rna, vt, wcd-est-sequence-clustering, weblogo, wgs-assembler, wgs-tools, wise2, yaggo, yaha, yasra, yass, zmap-genome-browser, zmsort
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