Maintainer sci-biology@gentoo.org

Contact

• E-Mail: sci-biology@gentoo.org

Repository activity

Repository	Packages	Projects										Feeds
		Total	Newest		Outdated		Problematic		Potentially vulnerable		See also
Gentoo Science overlay	378	304	192	63.2%	74	24.3%	1	0.3%	1	0.33%	HCO LN ∗ U	html, atom
Funtoo 1.4	208	155	83	53.5%	73	47.1%	-		-		HCO LN ∗ U	html, atom
LiGurOS 20.7	173	144	82	56.9%	59	41.0%	2	1.4%	-		HCO LN ∗ U	html, atom
LiGurOS 21.1	173	144	82	56.9%	59	41.0%	2	1.4%	-		HCO LN ∗ U	html, atom
Gentoo	173	144	82	56.9%	60	41.7%	2	1.4%	-		HCO LN ∗ U	html, atom
Total	1105	457	282	61.7%	142	31.1%	3	0.7%	1	0.22%	HCO LN ∗ U

Problems

There are 251 known problems for packages maintained by sci-biology@gentoo.org

Categories

This maintainer is active in the following package categories:

• sci-biology (414)
• dev-perl (17)
• sci-libs (15)
• dev-python (5)
• sci-visualization (1)
• dev-util (1)
• dev-libs (1)
• dev-lang (1)
• dev-java (1)
• app-arch (1)

Projects

aaindex, abacas, abyss, act-artemis-comparison-tool, aghermann, align-to-scf, aligngraph, allpathslg, amap-protein, amos, angle, angsd, apollo, arachne, argo, ariadne, assembly-stats, augustus, autoeditor, bam-readcount, bambino, bambus, bamql, bamtools, bamview, barnacle, barrnap, bbmap, bcftools, beagle-genotypes-phasing, beaglecall, bedops, bedtools, bfast, biobambam2, biogrep, biopandas, bioperl, bioperl-db, bioperl-network, bioperl-run, biopython, biosql, bismark, blasr, blasttosam, blat, blue, bowtie, bowtie2, braker, branch, brat, brat-bw, brat-nova, breakdancer, bwa, bx-python, caftools, canu, cast, cat, cd-hit, cd-hit-auxtools, cdbfasta, cegma, cg-cat, cgview, chiron, circos, clover, clustal-omega, clustalw, clustalw-mpi, clustalx, cluster-k-means, clview, cnrun, codonw, conform-gt, conifer, conrad, consed, coral-seq, cortex-var, cramtools, cross-genome, cutadapt, cutg, dawg, dcmtk, deeptools, dialign-tx, dialign2, diamond-aligner, diya, dna2pep, ebardenovo, edena, elph, embassy, embassy-cbstools, embassy-clustalomega, embassy-domainatrix, embassy-domalign, embassy-domsearch, embassy-emnu, embassy-esim4, embassy-hmmer, embassy-iprscan, embassy-meme, embassy-mse, embassy-phylipnew, embassy-signature, embassy-structure, embassy-topo, embassy-vienna, emboss, ensembl-tools, epcr, epga, erpin, est2assembly, estate, estscan, eugene, eval-gene-structure-prediction, exonerate, exonerate-gff3, express-rna-seq, fahclient, fast5, fasta, fastaq, fastdnaml, fastqc, fasttree, ffindex, finchtv, flash-seq, flexbar, freebayes, fsa, fsl, gal-genome-annotation-library, gap2caf, gatk, gbrowse, gemini, geneid, genepop, generecon, genomeview, germline, gffcompare, gffread, gfftools, gffutils, gibbs, glean, glimmer, glimmerhmm, gmap, go:db-perl, goby-cpp, goby-dns-sequencing, grabix, graf, grappa, grass, hexamer, hisat2, hmmer, hts-python, htseq, htsjdk, htslib, htslib-plugins, icc-seq, idba, iedera, igraph, igv, image, imagej, infernal, insighttoolkit, intermine, iqpnni, irods, jannovar, java-picard, jellyfish-k-mer, jhdf5, jigsaw-seq, jtreeview, kaks-calculator, kalign, kallisto, karect, kat, khmer-sequencing, king-kinship-based-inference, kmergenie, kraken, lagan, last, lastz, lib2bit, libbigwig, libdeflate, libgenome, libgtextutils, libmaus2, libmems, libmuscle, libstatgen, lighter, lucy, lumpy-sv, mafft, magicviewer, makefile2graph, maker, manatee-igs, manatee-jcvi, maq, maqview, masurca, mavid, mcl, megahit, meme-motif-discovery, merlin-linkage, mev, mgblast, minced, mip-scaffolder, mira, miranda-microrna, mochiview, molbiolib, mosaik, mothur, mrbayes, mreps, mrfast, mrnamarkup, mrsfast, msautil, mummer, muscle-sequence-alignment, museqbox, nanopolish, ncbi-blast+, ncbi-tools, ncbi-tools++, newick-utils, nextclip, ngsepcore, ngsepplugin, njplot, nrcl, ntcard, nwalign3, nxtrim, oases, obo-edit, onto-perl, orfcor, pairagon, pals, paml, paraat, parafly, pbbam, perga, perl:algorithm-loops, perl:bio-bigfile, perl:bio-db-das-chado, perl:bio-db-hts, perl:bio-ensembl, perl:btlib, perl:config-std, perl:dbix-dbstag, perl:librg-utils-perl, perl:log-cabin, perl:scalar-util-numeric, perl:set-intspan-fast, perl:text-graph, perl:text-parsewords, perl:text-recordparser, perl:time-progress, perlprimer, phrap, phred, phusion, phusion2, phylip, phyml, picard, piler, pilercr, pileup, pilon, plink, plinkseq, poa, polyphen, portrait, prank, primer3, primerd, prinseq-lite, prints, probcons, proda, prodigal, profnet, profphd, profphd-utils, prokka, proovread, prosite, prot4est, psipred, psx-seq, pvmsx, pybedtools, pyfaidx, pysam, pysamstats, python:bcbio-gff, python:intervaltree, python:py2bit, python:pybigwig, python:xopen, qrna, quast, quicktree, quorum-seq, radtools, raxml, rcorrector, reaper-seq, reapr, rebase-enzyme, recon, repeatmasker, repeatmasker-libraries, reptile, rmblast, rna-star, rnaplex, rnaview, roche454ace2caf, rseqc, rtg-tools, ruby:bio, ruby:rails, ruffus, rum-rna-mapper, sabre, sailfish, salmon, sambamba, samstat, samtools, scaffold-builder, scaffolder-evaluation, scan-for-matches, sclust, screed, scythe, seaview, seecer, seq-crumbs, seqan, seqclean, seqtk, seqtools, sff-dump, sga, sgp2, shrimp, sibelia, sibsim4, sickle, signalp, sim4, skewer, smalt, snap-gene-prediction, snpeff, snphylo, snpomatic, soapdenovo2, solexaqa, somatic-sniper, spades, sra-sdk, ssaha2, ssake, stacks, staden, staden-doc, stampy, starorf, stride, stringtie, subread, swissknife, t-coffee, tablet, tagdust, tclust, tigmint, tigr-foundation-libs, tmhmm, tophat, trans-abyss, transdecoder, transfac, tree-puzzle, treeviewx, trf-tandem-repeats-finder, trim-galore, trimmomatic, trinityrnaseq, trinotate, trnascan-se, trowel, twinscan, uchime, ucsc-genome-browser, unafold, update-blastdb, vaal, vague, vcflib, vcftools, velvet, velvetoptimiser, verifybamid, vienna-rna, vt, wcd-est-sequence-clustering, weblogo, wgs-assembler, wgs-tools, wise2, yaggo, yaha, yasra, yass, zmap-genome-browser, zmsort

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